6FD5
Crystal Structure of Human APRT-Tyr105Phe variant in complex with Adenine, PRPP and Mg2+, 14 days post crystallization (with AMP and PPi products partially generated)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Adenine phosphoribosyltransferase | polymer | 178 | 19411.5 | 2 | UniProt (P07741) Pfam (PF00156) | Homo sapiens (Human) | APRT |
| 2 | C, H (A, B) | ADENOSINE MONOPHOSPHATE | non-polymer | 347.2 | 2 | Chemie (AMP) PubChem (224) PubChem (34768) PubChem (83862) PubChem (446048) PubChem (515384) PubChem (638042) PubChem (5316444) PubChem (5742864) PubChem (12163610) PubChem (12358355) PubChem (16397049) PubChem (16760266) PubChem (40467049) PubChem (40469468) PubChem (44348067) PubChem (45358029) PubChem (46874558) PubChem (40459109) PubChem (46875232) PubChem (177678969) PubChem (6083) PubChem (1549371) PubChem (92144436) PubChem (57358045) PubChem (57879893) PubChem (57879902) PubChem (12358354) PubChem (122197642) PubChem (162290139) PubChem (162946266) PubChem (171699505) | |||
| 3 | D, J (A, B) | PYROPHOSPHATE | non-polymer | 178.0 | 2 | Chemie (PPV) PubChem (1023) | |||
| 4 | E, I (A, B) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) PubChem (888) | |||
| 5 | F (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) PubChem (753) | |||
| 6 | G (B) | 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose | non-polymer | 390.1 | 1 | Chemie (PRP) PubChem (1041) PubChem (7339) PubChem (23616411) PubChem (24771812) PubChem (90395114) PubChem (92962115) PubChem (126970134) | |||
| 7 | K, L (A, B) | water | water | 18.0 | 212 | Chemie (HOH) |
Sequence modifications
A, B: 3 - 180 (UniProt: P07741)
| PDB | External Database | Details |
|---|---|---|
| Phe 105 | Tyr 105 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 38822.9 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 1581.2 | |
| All* | Total formula weight | 40404.1 |






