6FB2
Crystal Structure of a Tailored I-CreI Homing Endonuclease Protein (3115 variant) in complex with its target DNA (Haemoglobin beta subunit gene) in the presence of Manganese
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (A) | DNA endonuclease I-CreI | polymer | 153 | 17528.2 | 1 | UniProt (P05725) Pfam (PF00961) | Chlamydomonas reinhardtii (Chlamydomonas smithii) | 23S rRNA intron protein |
2 | B (B) | DNA endonuclease I-CreI | polymer | 154 | 17583.2 | 1 | UniProt (P05725) Pfam (PF00961) | Chlamydomonas reinhardtii (Chlamydomonas smithii) | 23S rRNA intron protein |
3 | C (D) | DNA (5'-D(*TP*CP*AP*GP*AP*CP*TP*TP*CP*TP*CP*CP*AP*C)-3') | polymer | 14 | 4175.7 | 1 | synthetic construct | ||
4 | D (F) | DNA (5'-D(*TP*CP*TP*GP*AP*CP*TP*CP*CP*TP*GP*TP*GP*G)-3') | polymer | 14 | 4262.8 | 1 | synthetic construct | ||
5 | E (E) | DNA (5'-D(P*AP*GP*GP*AP*GP*TP*CP*AP*GP*A)-3') | polymer | 10 | 3118.1 | 1 | synthetic construct | ||
6 | F (G) | DNA (5'-D(P*AP*GP*AP*AP*GP*TP*CP*TP*GP*A)-3') | polymer | 10 | 3093.1 | 1 | synthetic construct | ||
7 | G, H, I (A) | MANGANESE (II) ION | non-polymer | 54.9 | 3 | Chemie (MN) | |||
8 | J, K, L, M, N (A, B, F, E, G) | water | water | 18.0 | 11 | Chemie (HOH) |
Sequence modifications
A: 2 - 154 (UniProt: P05725)
B: 2 - 155 (UniProt: P05725)
PDB | External Database | Details |
---|---|---|
Ser 19 | Gly 19 | conflict |
Val 33 | Tyr 33 | conflict |
Arg 38 | Gln 38 | conflict |
Gln 40 | Ser 40 | conflict |
Asp 44 | Gln 44 | conflict |
Ala 68 | Arg 68 | conflict |
Ser 70 | Arg 70 | conflict |
Lys 75 | Asp 75 | conflict |
Arg 77 | Ile 77 | conflict |
PDB | External Database | Details |
---|---|---|
Gly 33 | Tyr 33 | conflict |
Lys 38 | Gln 38 | conflict |
Lys 44 | Gln 44 | conflict |
Tyr 68 | Arg 68 | conflict |
Ser 70 | Arg 70 | conflict |
Asn 75 | Asp 75 | conflict |
Tyr 77 | Ile 77 | conflict |
Val 132 | Ile 132 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 49761.0 | |
Non-Polymers* | Number of molecules | 3 |
Total formula weight | 164.8 | |
All* | Total formula weight | 49925.8 |