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6FB2

Crystal Structure of a Tailored I-CreI Homing Endonuclease Protein (3115 variant) in complex with its target DNA (Haemoglobin beta subunit gene) in the presence of Manganese

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA endonuclease I-CreIpolymer15317528.21UniProt (P05725)
Pfam (PF00961)
Chlamydomonas reinhardtii (Chlamydomonas smithii)23S rRNA intron protein
2B
(B)
DNA endonuclease I-CreIpolymer15417583.21UniProt (P05725)
Pfam (PF00961)
Chlamydomonas reinhardtii (Chlamydomonas smithii)23S rRNA intron protein
3C
(D)
DNA (5'-D(*TP*CP*AP*GP*AP*CP*TP*TP*CP*TP*CP*CP*AP*C)-3')polymer144175.71synthetic construct
4D
(F)
DNA (5'-D(*TP*CP*TP*GP*AP*CP*TP*CP*CP*TP*GP*TP*GP*G)-3')polymer144262.81synthetic construct
5E
(E)
DNA (5'-D(P*AP*GP*GP*AP*GP*TP*CP*AP*GP*A)-3')polymer103118.11synthetic construct
6F
(G)
DNA (5'-D(P*AP*GP*AP*AP*GP*TP*CP*TP*GP*A)-3')polymer103093.11synthetic construct
7G, H, I
(A)
MANGANESE (II) IONnon-polymer54.93Chemie (MN)
8J, K, L, M, N
(A, B, F, E, G)
waterwater18.011Chemie (HOH)
Sequence modifications
A: 2 - 154 (UniProt: P05725)
PDBExternal DatabaseDetails
Ser 19Gly 19conflict
Val 33Tyr 33conflict
Arg 38Gln 38conflict
Gln 40Ser 40conflict
Asp 44Gln 44conflict
Ala 68Arg 68conflict
Ser 70Arg 70conflict
Lys 75Asp 75conflict
Arg 77Ile 77conflict
B: 2 - 155 (UniProt: P05725)
PDBExternal DatabaseDetails
Gly 33Tyr 33conflict
Lys 38Gln 38conflict
Lys 44Gln 44conflict
Tyr 68Arg 68conflict
Ser 70Arg 70conflict
Asn 75Asp 75conflict
Tyr 77Ile 77conflict
Val 132Ile 132conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight49761.0
Non-Polymers*Number of molecules3
Total formula weight164.8
All*Total formula weight49925.8
*Water molecules are not included.

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PDB entries from 2024-11-06

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