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6FAZ

Crystal structure of the GluA2 ligand-binding domain (S1S2J) in complex with the positive allosteric modulator TDPAM01 at 1.4 A resolution.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Glutamate receptor 2polymer26429278.72UniProt (P19491)
Pfam (PF10613)
Pfam (PF00060)
Rattus norvegicus (Rat)GluR-2,AMPA-selective glutamate receptor 2,GluR-B,GluR-K2,Glutamate receptor ionotropic,AMPA 2,GluA2
2C, D, E, Q, R
(A, B)
SULFATE IONnon-polymer96.15Chemie (SO4)
3F, G
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.12Chemie (PEG)
4H, I, J, K, S
(A, B)
GLYCEROLnon-polymer92.15Chemie (GOL)
5L, T, U, V, W
(A, B)
CHLORIDE IONnon-polymer35.55Chemie (CL)
6M, X, Y
(A, B)
ACETATE IONnon-polymer59.03Chemie (ACT)
7N, Z
(A, B)
GLUTAMIC ACIDnon-polymer147.12Chemie (GLU)
8AA, O
(B, A)
1,2-ETHANEDIOLnon-polymer62.12Chemie (EDO)
9P
(B)
6,6'-(Ethane-1,2-diyl)bis(4-methyl-3,4-dihydro-2H-1,2,4-benzothiadiazine 1,1-dioxide)non-polymer422.51Chemie (D45)
10BA, CA
(A, B)
waterwater18.0661Chemie (HOH)
Sequence modifications
A, B: 3 - 117 (UniProt: P19491)
PDBExternal DatabaseDetails
Gly 1-expression tag
Ala 2-expression tag
A, B: 120 - 264 (UniProt: P19491)
PDBExternal DatabaseDetails
Gly 118-linker
Thr 119-linker
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight58557.5
Non-Polymers*Number of molecules25
Total formula weight2348.3
All*Total formula weight60905.8
*Water molecules are not included.

238895

PDB entries from 2025-07-16

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