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6F2A

Crystal structure of the complex Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO1 with Fe(II)/Lysine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
L-lysine 3-hydroxylasepolymer35839236.24UniProt (C7QJ42)Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897)Alpha-ketoglutarate-dependent dioxygenase,KDO1,L-lysine hydroxylase
2E, K, M, Q
(A, B, C, D)
FE (II) IONnon-polymer55.84Chemie (FE2)
3F, G, L, N, R
(A, B, C, D)
LYSINEnon-polymer147.25Chemie (LYS)
4H, I, O, P, S
(A, C, D)
ACETIC ACIDnon-polymer60.15Chemie (ACY)
5J
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
6T, U, V, W
(A, B, C, D)
waterwater18.0706Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight156944.8
Non-Polymers*Number of molecules15
Total formula weight1295.1
All*Total formula weight158239.9
*Water molecules are not included.

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PDB entries from 2025-06-18

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