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6EXH

Crystal structure of the complex Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5 with Fe(II)/succinate/(4R)-4-hydroxy-L-lysine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, DL-lysine 4-hydroxylasepolymer37241817.14UniProt (J3BZS6)
In PDB
Flavobacterium sp.Alpha-ketoglutarate-dependent dioxygenase,KDO5,L-lysine hydroxylase
2A, B, C, DFE (III) IONnon-polymer55.84Chemie (FE)
3A, B, C, D4-HYDROXY-LYSINEnon-polymer162.24Chemie (LYO)
4A, B, DSUCCINIC ACIDnon-polymer118.13Chemie (SIN)
5A, C, DGLYCEROLnon-polymer92.13Chemie (GOL)
6waterwater18.0434Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight167268.5
Non-Polymers*Number of molecules14
Total formula weight1502.7
All*Total formula weight168771.2
*Water molecules are not included.

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PDB entries from 2024-10-16

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