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6EUO

Crystal structure of APO Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
L-lysine 4-hydroxylasepolymer37241817.14UniProt (J3BZS6)Flavobacterium sp. (strain CF136)Alpha-ketoglutarate-dependent dioxygenase,KDO5,L-lysine hydroxylase
2E, J, N, T
(A, B, C, D)
FE (III) IONnon-polymer55.84Chemie (FE)
3F, K, O, U
(A, B, C, D)
D-MALATEnon-polymer134.14Chemie (MLT)
4G, H, L, M, P...
(A, B, C)
GLYCEROLnon-polymer92.17Chemie (GOL)
5I, S, V
(A, C, D)
SULFATE IONnon-polymer96.13Chemie (SO4)
6W, X, Y, Z
(A, B, C, D)
waterwater18.0525Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight167268.5
Non-Polymers*Number of molecules18
Total formula weight1692.6
All*Total formula weight168961.1
*Water molecules are not included.

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PDB entries from 2025-12-10

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