6EUO

Crystal structure of APO Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0016491	molecular_function	oxidoreductase activity
A	0016706	molecular_function	2-oxoglutarate-dependent dioxygenase activity
A	0046872	molecular_function	metal ion binding
A	0051213	molecular_function	dioxygenase activity
A	0055114	biological_process	obsolete oxidation-reduction process
B	0016491	molecular_function	oxidoreductase activity
B	0016706	molecular_function	2-oxoglutarate-dependent dioxygenase activity
B	0046872	molecular_function	metal ion binding
B	0051213	molecular_function	dioxygenase activity
B	0055114	biological_process	obsolete oxidation-reduction process
C	0016491	molecular_function	oxidoreductase activity
C	0016706	molecular_function	2-oxoglutarate-dependent dioxygenase activity
C	0046872	molecular_function	metal ion binding
C	0051213	molecular_function	dioxygenase activity
C	0055114	biological_process	obsolete oxidation-reduction process
D	0016491	molecular_function	oxidoreductase activity
D	0016706	molecular_function	2-oxoglutarate-dependent dioxygenase activity
D	0046872	molecular_function	metal ion binding
D	0051213	molecular_function	dioxygenase activity
D	0055114	biological_process	obsolete oxidation-reduction process

Functional Information from PDB Data

site_id	AC1
Number of Residues	4
Details	binding site for residue FE A 401

Chain	Residue
A	HIS176
A	GLU178
A	HIS312
A	MLT402

---

site_id	AC2
Number of Residues	12
Details	binding site for residue MLT A 402

Chain	Residue
A	HIS312
A	ARG334
A	MET336
A	ARG338
A	FE401
A	HOH513
A	HOH554
A	VAL154
A	LEU173
A	HIS176
A	GLU178
A	PHE191

---

site_id	AC3
Number of Residues	5
Details	binding site for residue GOL A 403

Chain	Residue
A	ARG353
A	THR354
A	ASP355
A	MET361
A	HOH536

---

site_id	AC4
Number of Residues	6
Details	binding site for residue GOL A 404

Chain	Residue
A	GLU53
A	GLN140
A	LEU150
A	ASP356
A	TYR358
A	HOH601

---

site_id	AC5
Number of Residues	6
Details	binding site for residue SO4 A 405

Chain	Residue
A	ARG145
A	THR165
A	GLY166
A	SER167
A	ARG338
A	HOH576

---

site_id	AC6
Number of Residues	5
Details	binding site for residue FE B 401

Chain	Residue
B	HIS176
B	GLU178
B	HIS312
B	MLT402
B	HOH522

---

site_id	AC7
Number of Residues	8
Details	binding site for residue MLT B 402

Chain	Residue
B	GLN144
B	ARG145
B	GLY166
B	SER167
B	GLU178
B	ARG338
B	FE401
B	HOH522

---

site_id	AC8
Number of Residues	3
Details	binding site for residue GOL B 403

Chain	Residue
B	GLN33
D	LEU44
D	HIS64

---

site_id	AC9
Number of Residues	5
Details	binding site for residue GOL B 404

Chain	Residue
B	ARG353
B	THR354
B	ASP355
B	MET361
B	HOH527

---

site_id	AD1
Number of Residues	4
Details	binding site for residue FE C 401

Chain	Residue
C	HIS176
C	GLU178
C	HIS312
C	MLT402

---

site_id	AD2
Number of Residues	12
Details	binding site for residue MLT C 402

Chain	Residue
C	GLY166
C	HIS176
C	GLU178
C	PHE191
C	HIS312
C	ARG314
C	ARG334
C	MET336
C	ARG338
C	FE401
C	SO4406
C	HOH549

---

site_id	AD3
Number of Residues	4
Details	binding site for residue GOL C 403

Chain	Residue
C	ILE58
C	GLN140
C	ASP356
C	TYR358

---

site_id	AD4
Number of Residues	7
Details	binding site for residue GOL C 404

Chain	Residue
C	GLN102
C	ASP103
C	GLY106
C	PRO107
C	ARG195
C	GLU332
C	HOH523

---

site_id	AD5
Number of Residues	7
Details	binding site for residue GOL C 405

Chain	Residue
C	THR23
C	THR289
C	ILE291
C	ASN292
C	ASP294
C	HOH535
C	HOH541

---

site_id	AD6
Number of Residues	7
Details	binding site for residue SO4 C 406

Chain	Residue
C	ARG145
C	THR165
C	GLY166
C	SER167
C	ARG338
C	MLT402
C	HOH521

---

site_id	AD7
Number of Residues	4
Details	binding site for residue FE D 401

Chain	Residue
D	HIS176
D	GLU178
D	HIS312
D	MLT402

---

site_id	AD8
Number of Residues	10
Details	binding site for residue MLT D 402

Chain	Residue
D	GLY166
D	LEU173
D	GLU178
D	HIS312
D	GLY313
D	ARG334
D	MET336
D	ARG338
D	FE401
D	HOH534

---

site_id	AD9
Number of Residues	6
Details	binding site for residue SO4 D 403

Chain	Residue
D	ARG145
D	THR165
D	GLY166
D	SER167
D	ARG338
D	HOH542

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	12
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"Q9Z4Z5","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

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