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6ETE

Crystal structure of KDM4D with tetrazolhydrazide compound 5

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Lysine-specific demethylase 4Dpolymer34239491.81UniProt (Q6B0I6)
Pfam (PF02375)
Pfam (PF02373)
Homo sapiens (Human)JmjC domain-containing histone demethylation protein 3D,Jumonji domain-containing protein 2D
2B
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
3C, D
(A)
NICKEL (II) IONnon-polymer58.72Chemie (NI)
4E, F, G, H, I...
(A)
1,2-ETHANEDIOLnon-polymer62.17Chemie (EDO)
5L, M
(A)
SULFATE IONnon-polymer96.12Chemie (SO4)
6N
(A)
[2-(1-methyl-1,2,3,4-tetrazol-4-ium-5-yl)ethanoylamino]azaniumnon-polymer158.21Chemie (BWK)
7O
(A)
waterwater18.0351Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight39491.8
Non-Polymers*Number of molecules13
Total formula weight967.6
All*Total formula weight40459.4
*Water molecules are not included.

250059

PDB entries from 2026-03-04

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