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6EQ8

Structure of the periplasmic binding protein (PBP) MelB (Atu4661) in complex with galactinol from agrobacterium fabrum C58

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(D, B, C, A)
Periplasmic alpha-galactoside-binding proteinpolymer68376359.64UniProt (A0A083ZM57)Rhizobium radiobacter (Agrobacterium tumefaciens)MelB
2AA, AB, BA, BB, CA...
(B, C, D, A)
1,2-ETHANEDIOLnon-polymer62.139Chemie (EDO)
3EA, GB, L, TC
(B, C, D, A)
galactinolnon-polymer342.34Chemie (BQZ)
4FA, GA, HA, HB, IB...
(B, C, D, A)
CALCIUM IONnon-polymer40.113Chemie (CA)
5IA, LB, MB, N, NB...
(B, C, D, A)
DI(HYDROXYETHYL)ETHERnon-polymer106.19Chemie (PEG)
6AD, PB, Q
(A, C, D)
1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANEnon-polymer162.23Chemie (P4G)
7BD, QB, R
(A, C, D)
TETRAETHYLENE GLYCOLnon-polymer194.23Chemie (PG4)
8AC, BC, CC, CD, DC...
(C, A, B, D)
CHLORIDE IONnon-polymer35.535Chemie (CL)
9GD, HD, ID, JD
(D, B, C, A)
waterwater18.0862Chemie (HOH)
Sequence modifications
D, B, C, A: 1 - 677 (UniProt: A0A083ZM57)
PDBExternal DatabaseDetails
His 678-expression tag
His 679-expression tag
His 680-expression tag
His 681-expression tag
His 682-expression tag
His 683-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight305438.4
Non-Polymers*Number of molecules106
Total formula weight7576.1
All*Total formula weight313014.6
*Water molecules are not included.

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PDB entries from 2025-07-09

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