6EQ8
Structure of the periplasmic binding protein (PBP) MelB (Atu4661) in complex with galactinol from agrobacterium fabrum C58
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D (D, B, C, A) | Periplasmic alpha-galactoside-binding protein | polymer | 683 | 76359.6 | 4 | UniProt (A0A083ZM57) | Rhizobium radiobacter (Agrobacterium tumefaciens) | MelB |
2 | AA, AB, BA, BB, CA... (B, C, D, A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 39 | Chemie (EDO) | |||
3 | EA, GB, L, TC (B, C, D, A) | galactinol | non-polymer | 342.3 | 4 | Chemie (BQZ) | |||
4 | FA, GA, HA, HB, IB... (B, C, D, A) | CALCIUM ION | non-polymer | 40.1 | 13 | Chemie (CA) | |||
5 | IA, LB, MB, N, NB... (B, C, D, A) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 9 | Chemie (PEG) | |||
6 | AD, PB, Q (A, C, D) | 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE | non-polymer | 162.2 | 3 | Chemie (P4G) | |||
7 | BD, QB, R (A, C, D) | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 3 | Chemie (PG4) | |||
8 | AC, BC, CC, CD, DC... (C, A, B, D) | CHLORIDE ION | non-polymer | 35.5 | 35 | Chemie (CL) | |||
9 | GD, HD, ID, JD (D, B, C, A) | water | water | 18.0 | 862 | Chemie (HOH) |
Sequence modifications
D, B, C, A: 1 - 677 (UniProt: A0A083ZM57)
PDB | External Database | Details |
---|---|---|
His 678 | - | expression tag |
His 679 | - | expression tag |
His 680 | - | expression tag |
His 681 | - | expression tag |
His 682 | - | expression tag |
His 683 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 305438.4 | |
Non-Polymers* | Number of molecules | 106 |
Total formula weight | 7576.1 | |
All* | Total formula weight | 313014.6 |