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6EJ7

Human Xylosyltransferase 1 in complex with UDP-xylose and peptide QEEEGAGGGQGG

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AXylosyltransferase 1polymer75186122.01UniProt (Q86Y38)
Pfam (PF02485)
Pfam (PF12529)
In PDB
Homo sapiens (Human)Peptide O-xylosyltransferase 1,Xylosyltransferase I,XylT-I
2BProtein AMBPpolymer121075.01UniProt (P02760)
In PDB
Homo sapiens
3A2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.21Chemie (NAG)
4AURIDINE-5'-DIPHOSPHATE-XYLOPYRANOSEnon-polymer536.31Chemie (UDX)
5ASODIUM IONnon-polymer23.01Chemie (NA)
6APHOSPHATE IONnon-polymer95.09Chemie (PO4)
7A1,2-ETHANEDIOLnon-polymer62.14Chemie (EDO)
8ADI(HYDROXYETHYL)ETHERnon-polymer106.12Chemie (PEG)
9waterwater18.0366Chemie (HOH)
Sequence modifications
A: 232 - 959 (UniProt: Q86Y38)
PDBExternal DatabaseDetails
Ala 209-expression tag
Pro 210-expression tag
Leu 211-expression tag
Val 212-expression tag
His 213-expression tag
His 214-expression tag
His 215-expression tag
His 216-expression tag
His 217-expression tag
His 218-expression tag
Ala 219-expression tag
Leu 220-expression tag
Asp 221-expression tag
Glu 222-expression tag
Asn 223-expression tag
Leu 224-expression tag
Tyr 225-expression tag
Phe 226-expression tag
Gln 227-expression tag
Gly 228-expression tag
Ala 229-expression tag
Leu 230-expression tag
Ala 231-expression tag
B: 210 - 221 (UniProt: P02760)
PDBExternal DatabaseDetails
Ala 215Ser 215engineered mutation
Gly 220Leu 220engineered mutation
Gly 221Val 221engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight87197.1
Non-Polymers*Number of molecules18
Total formula weight2095.7
All*Total formula weight89292.8
*Water molecules are not included.

221051

PDB entries from 2024-06-12

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