6EJ7
Human Xylosyltransferase 1 in complex with UDP-xylose and peptide QEEEGAGGGQGG
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Xylosyltransferase 1 | polymer | 751 | 86122.0 | 1 | UniProt (Q86Y38) Pfam (PF02485) Pfam (PF12529) | Homo sapiens (Human) | Peptide O-xylosyltransferase 1,Xylosyltransferase I,XylT-I |
| 2 | B (B) | Protein AMBP | polymer | 12 | 1075.0 | 1 | UniProt (P02760) | Homo sapiens | |
| 3 | C (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 4 | D (A) | URIDINE-5'-DIPHOSPHATE-XYLOPYRANOSE | non-polymer | 536.3 | 1 | Chemie (UDX) | |||
| 5 | E (A) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 6 | F, G, H, I, J... (A) | PHOSPHATE ION | non-polymer | 95.0 | 9 | Chemie (PO4) | |||
| 7 | O, P, Q, R (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 4 | Chemie (EDO) | |||
| 8 | S, T (A) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 2 | Chemie (PEG) | |||
| 9 | U, V (A, B) | water | water | 18.0 | 366 | Chemie (HOH) |
Sequence modifications
A: 232 - 959 (UniProt: Q86Y38)
B: 210 - 221 (UniProt: P02760)
| PDB | External Database | Details |
|---|---|---|
| Ala 209 | - | expression tag |
| Pro 210 | - | expression tag |
| Leu 211 | - | expression tag |
| Val 212 | - | expression tag |
| His 213 | - | expression tag |
| His 214 | - | expression tag |
| His 215 | - | expression tag |
| His 216 | - | expression tag |
| His 217 | - | expression tag |
| His 218 | - | expression tag |
| Ala 219 | - | expression tag |
| Leu 220 | - | expression tag |
| Asp 221 | - | expression tag |
| Glu 222 | - | expression tag |
| Asn 223 | - | expression tag |
| Leu 224 | - | expression tag |
| Tyr 225 | - | expression tag |
| Phe 226 | - | expression tag |
| Gln 227 | - | expression tag |
| Gly 228 | - | expression tag |
| Ala 229 | - | expression tag |
| Leu 230 | - | expression tag |
| Ala 231 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ala 215 | Ser 215 | engineered mutation |
| Gly 220 | Leu 220 | engineered mutation |
| Gly 221 | Val 221 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 87197.1 | |
| Non-Polymers* | Number of molecules | 18 |
| Total formula weight | 2095.7 | |
| All* | Total formula weight | 89292.8 |






