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6EHH

Crystal structure of mouse MTH1 mutant L116M with inhibitor TH588

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
7,8-dihydro-8-oxoguanine triphosphatasepolymer17620119.74UniProt (P53368)
Pfam (PF00293)
Mus musculus (House Mouse)2-hydroxy-dATP diphosphatase,8-oxo-dGTPase,Nucleoside diphosphate-linked moiety X motif 1,Nudix motif 1
2E, IA, N, W
(A, D, B, C)
N~4~-cyclopropyl-6-(2,3-dichlorophenyl)pyrimidine-2,4-diaminenon-polymer295.24Chemie (2GE)
3AA, BA, F, G, H...
(C, A, D, B)
NITRATE IONnon-polymer62.019Chemie (NO3)
4CA, DA, EA, L, U
(C, A, B)
DI(HYDROXYETHYL)ETHERnon-polymer106.15Chemie (PEG)
5FA, GA, M, V
(C, A, B)
GLYCEROLnon-polymer92.14Chemie (GOL)
6JA, O, X, Y
(D, B, C)
COPPER (II) IONnon-polymer63.54Chemie (CU)
7HA
(C)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
8PA, QA, RA, SA
(A, B, C, D)
waterwater18.0261Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 156 (UniProt: P53368)
PDBExternal DatabaseDetails
Met -19-initiating methionine
Gly -18-expression tag
Ser -17-expression tag
Ser -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
His -10-expression tag
Ser -9-expression tag
Ser -8-expression tag
Gly -7-expression tag
Leu -6-expression tag
Val -5-expression tag
Pro -4-expression tag
Arg -3-expression tag
Gly -2-expression tag
Ser -1-expression tag
His 0-expression tag
Met 116Leu 116engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight80478.8
Non-Polymers*Number of molecules37
Total formula weight3536.2
All*Total formula weight84015.0
*Water molecules are not included.

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PDB entries from 2025-06-18

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