6EG0
Crystal structure of Dpr4 Ig1-Ig2 in complex with DIP-Eta Ig1-Ig3
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Defective proboscis extension response 4 | polymer | 220 | 24741.8 | 1 | UniProt (Q59DX6) Pfam (PF07686) Pfam (PF13927) In PDB | Drosophila melanogaster (Fruit fly) | Dpr4, FI04761p |
| 2 | B | Dpr-interacting protein eta, isoform B | polymer | 314 | 34983.0 | 1 | UniProt (Q9VMN9) Pfam (PF07679) Pfam (PF13927) In PDB | Drosophila melanogaster (Fruit fly) | DIP-Eta, Dpr-interacting protein eta,isoform D |
| 3 | C | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 1 | In PDB GlyTouCan (G21290RB) | |||
| 4 | D | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G32152BH) | |||
| 5 | E | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 894.8 | 1 | In PDB GlyTouCan (G42466VF) | |||
| 6 | F | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1463.3 | 1 | In PDB GlyTouCan (G80858MF) | |||
| 7 | B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 8 | B | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 2 | Chemie (PEG) | |||
| 9 | B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 10 | B | ACETATE ION | non-polymer | 59.0 | 2 | Chemie (ACT) | |||
| 11 | water | water | 18.0 | 47 | Chemie (HOH) |
Sequence modifications
A: 32 - 246 (UniProt: Q59DX6)
B: 31 - 338 (UniProt: Q9VMN9)
| PDB | External Database | Details |
|---|---|---|
| His 247 | - | expression tag |
| His 248 | - | expression tag |
| His 249 | - | expression tag |
| His 250 | - | expression tag |
| His 251 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| His 339 | - | expression tag |
| His 340 | - | expression tag |
| His 341 | - | expression tag |
| His 342 | - | expression tag |
| His 343 | - | expression tag |
| His 344 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 59724.7 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 3661.4 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 613.6 | |
| All* | Total formula weight | 63999.7 |
