6EAY
Structural Basis for Broad Neutralization of Ebolaviruses by an Antibody Targeting the Glycoprotein Fusion Loop
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | L | CA45 light chain | polymer | 215 | 23291.8 | 1 | Macaca fascicularis | ||
2 | H | CA45 heavy chain | polymer | 237 | 25169.2 | 1 | Macaca fascicularis | ||
3 | A | Envelope glycoprotein | polymer | 163 | 18636.9 | 1 | UniProt (Q05320) Pfam (PF22307) In PDB | Zaire ebolavirus (strain Mayinga-76) (ZEBOV) | GP1,2,GP |
4 | B | Envelope glycoprotein | polymer | 319 | 35319.6 | 1 | UniProt (Q05320) Pfam (PF01611) In PDB | Zaire ebolavirus (strain Mayinga-76) (ZEBOV) | GP1,2,GP |
5 | C | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1397.2 | 1 | In PDB GlyTouCan (G80966KZ) | |||
6 | B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) |
Sequence modifications
A: 502 - 637 (UniProt: Q05320)
B: 32 - 311 (UniProt: Q05320)
B: 312 - 350 (UniProt: Q05320)
PDB | External Database | Details |
---|---|---|
Thr 544 | Ile 544 | conflict |
Gly 638 | - | expression tag |
Glu 639 | - | expression tag |
Asn 640 | - | expression tag |
Leu 641 | - | expression tag |
Tyr 642 | - | expression tag |
Phe 643 | - | expression tag |
Gln 644 | - | expression tag |
Ser 645 | - | expression tag |
Gly 646 | - | expression tag |
Ser 647 | - | expression tag |
Ala 648 | - | expression tag |
Trp 649 | - | expression tag |
Ser 650 | - | expression tag |
His 651 | - | expression tag |
Pro 652 | - | expression tag |
Gln 653 | - | expression tag |
Phe 654 | - | expression tag |
Glu 655 | - | expression tag |
Lys 656 | - | expression tag |
His 657 | - | expression tag |
His 658 | - | expression tag |
His 659 | - | expression tag |
His 660 | - | expression tag |
His 661 | - | expression tag |
His 662 | - | expression tag |
His 663 | - | expression tag |
His 664 | - | expression tag |
B: 312 - 350 (UniProt: Q05320)
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 102417.4 | |
Branched | Number of molecules | 1 |
Total formula weight | 1397.2 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 442.4 | |
All* | Total formula weight | 104257.1 |