6E48
Crystal Structure of the Murine Norovirus VP1 P domain in complex with the CD300lf Receptor and Lithocholic Acid
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | VP1 P domain | polymer | 304 | 33050.2 | 2 | UniProt (Q80J94) Pfam (PF08435) In PDB | Murine norovirus 1 | VP1 |
| 2 | F, G | CMRF35-like molecule 1 | polymer | 113 | 12786.5 | 2 | UniProt (Q6SJQ7) Pfam (PF07686) In PDB | Mus musculus (Mouse) | CLM-1, CD300 antigen-like family member F, Leukocyte mono-Ig-like receptor 3, Myeloid-associated immunoglobulin-like receptor 5, MAIR-V |
| 3 | A, B | (3beta,5beta,14beta,17alpha)-3-hydroxycholan-24-oic acid | non-polymer | 376.6 | 2 | Chemie (4OA) | |||
| 4 | A, B, F | CALCIUM ION | non-polymer | 40.1 | 6 | Chemie (CA) | |||
| 5 | A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 6 | water | water | 18.0 | 1132 | Chemie (HOH) |
Sequence modifications
F, G: 1 - 112 (UniProt: Q6SJQ7)
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 91673.4 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 1055.7 | |
| All* | Total formula weight | 92729.1 |
