6DZI
Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (h) | 16S rRNA | polymer | 1511 | 490111.7 | 1 | GenBank (118168627) | Mycobacterium smegmatis str. MC2 155 | |
| 2 | B (j) | CONSERVED PROTEIN DOMAIN | polymer | 32 | 4033.1 | 1 | Mycobacterium smegmatis str. MC2 155 | ||
| 3 | C (k) | 30S ribosomal protein S3 | polymer | 208 | 23617.2 | 1 | UniProt (A0QSD7) Pfam (PF07650) Pfam (PF00189) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 4 | D (l) | 30S ribosomal protein S4 | polymer | 200 | 23284.6 | 1 | UniProt (A0QSL7) Pfam (PF00163) Pfam (PF01479) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 5 | E (m) | 30S ribosomal protein S5 | polymer | 180 | 18481.4 | 1 | UniProt (A0QSG6) Pfam (PF00333) Pfam (PF03719) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 6 | F (n) | 30S ribosomal protein S6 | polymer | 96 | 10991.6 | 1 | UniProt (A0A0D6J3X3) | Mycobacterium smegmatis | |
| 7 | G (p) | 30S ribosomal protein S7 | polymer | 155 | 17529.2 | 1 | UniProt (A0QS97) Pfam (PF00177) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 8 | H (q) | 30S ribosomal protein S8 | polymer | 131 | 14361.4 | 1 | UniProt (A0QSG3) Pfam (PF00410) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 9 | I (4) | 30S ribosomal protein S9 | polymer | 126 | 14093.4 | 1 | UniProt (A0QSP9) Pfam (PF00380) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 10 | J (s) | 30S ribosomal protein S10 | polymer | 99 | 11252.0 | 1 | UniProt (A0QSD0) Pfam (PF00338) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 11 | K (t) | 30S ribosomal protein S11 | polymer | 115 | 12151.7 | 1 | UniProt (A0QSL6) Pfam (PF00411) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 12 | L (u) | 30S ribosomal protein S12 | polymer | 122 | 13678.1 | 1 | UniProt (A0QS96) Pfam (PF00164) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 13 | M (v) | 30S ribosomal protein S13 | polymer | 116 | 13374.5 | 1 | UniProt (A0QSL5) Pfam (PF00416) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 14 | N (x) | 30S ribosomal protein S15 | polymer | 88 | 10236.9 | 1 | UniProt (A0QVQ3) Pfam (PF00312) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 15 | O (z) | 30S ribosomal protein S16 | polymer | 113 | 12635.7 | 1 | UniProt (A0QV37) Pfam (PF00886) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 16 | P (5) | 30S ribosomal protein S17 | polymer | 94 | 10680.5 | 1 | UniProt (A0QSE0) Pfam (PF00366) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 17 | Q (6) | 30S ribosomal protein S19 | polymer | 82 | 9379.9 | 1 | UniProt (A0QSD5) Pfam (PF00203) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 18 | R (7) | 30S ribosomal protein S20 | polymer | 85 | 9424.9 | 1 | UniProt (A0R102) Pfam (PF01649) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 19 | S (8) | 30S ribosomal protein S2 | polymer | 228 | 25576.5 | 1 | UniProt (A0QVB8) Pfam (PF00318) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 20 | T (r) | 30S ribosomal protein S18 1 | polymer | 84 | 9449.2 | 1 | UniProt (A0R549) Pfam (PF01084) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 21 | U (Y) | Ribosome hibernation promoting factor | polymer | 103 | 12238.9 | 1 | UniProt (A0QTK6) Pfam (PF02482) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | HPF |
| 22 | V (9) | 30S ribosomal protein S14 | polymer | 100 | 11661.5 | 1 | UniProt (A0R550) Pfam (PF00253) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 23 | W (A) | 23 S rRNA (3119-MER) | polymer | 3119 | 1011834.8 | 1 | GenBank (118168627) | Mycobacterium smegmatis str. MC2 155 | |
| 24 | X (B) | 5S RNA (118-MER) | polymer | 118 | 38061.8 | 1 | GenBank (118168627) | Mycobacterium smegmatis str. MC2 155 | |
| 25 | Y (C) | 50S ribosomal protein L2 | polymer | 275 | 30008.4 | 1 | UniProt (A0QSD4) Pfam (PF00181) Pfam (PF03947) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 26 | Z (D) | 50S ribosomal protein L3 | polymer | 214 | 22621.9 | 1 | UniProt (A0QSD1) Pfam (PF00297) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 27 | AA (E) | 50S ribosomal protein L4 | polymer | 209 | 22346.3 | 1 | UniProt (A0QSD2) Pfam (PF00573) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 28 | BA (F) | 50S ribosomal protein L5 | polymer | 182 | 20588.7 | 1 | UniProt (A0QSG1) Pfam (PF00281) Pfam (PF00673) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 29 | CA (G) | 50S ribosomal protein L6 | polymer | 176 | 19165.9 | 1 | UniProt (A0QSG4) Pfam (PF00347) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 30 | DA (H) | 50S ribosomal protein L9 | polymer | 151 | 15949.3 | 1 | UniProt (A0R7F6) Pfam (PF01281) Pfam (PF03948) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 31 | EA (I) | 50S ribosomal protein L10 | polymer | 126 | 13095.0 | 1 | UniProt (A0QS62) Pfam (PF00466) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 32 | FA (J) | 50S ribosomal protein L11 | polymer | 133 | 14109.2 | 1 | UniProt (A0QS45) Pfam (PF03946) Pfam (PF00298) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 33 | GA (K) | 50S ribosomal protein L13 | polymer | 146 | 16015.5 | 1 | UniProt (A0QSP8) Pfam (PF00572) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 34 | HA (L) | 50S ribosomal protein L14 | polymer | 122 | 13400.6 | 1 | UniProt (A0QSF9) Pfam (PF00238) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 35 | IA (M) | 50S ribosomal protein L15 | polymer | 145 | 15384.0 | 1 | UniProt (I7G436) Pfam (PF00828) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 36 | JA (N) | 50S ribosomal protein L16 | polymer | 136 | 15498.9 | 1 | UniProt (A0QSD8) Pfam (PF00252) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 37 | KA (O) | 50S ribosomal protein L17 | polymer | 118 | 13210.3 | 1 | UniProt (A0QSL9) Pfam (PF01196) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 38 | LA (P) | 50S ribosomal protein L18 | polymer | 126 | 13580.5 | 1 | UniProt (I7FGD9) Pfam (PF00861) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 39 | MA (Q) | 50S ribosomal protein L19 | polymer | 113 | 12892.8 | 1 | UniProt (A0QV42) Pfam (PF01245) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 40 | NA (R) | 50S ribosomal protein L20 | polymer | 124 | 14035.2 | 1 | UniProt (A0QYU6) Pfam (PF00453) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 41 | OA (S) | 50S ribosomal protein L21 | polymer | 100 | 10724.4 | 1 | UniProt (A0R151) Pfam (PF00829) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 42 | PA (T) | 50S ribosomal protein L22 | polymer | 114 | 12408.2 | 1 | UniProt (A0QSD6) Pfam (PF00237) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 43 | QA (U) | 50S ribosomal protein L23 | polymer | 97 | 10748.4 | 1 | UniProt (A0QSD3) Pfam (PF00276) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 44 | RA (V) | 50S ribosomal protein L24 | polymer | 105 | 11228.9 | 1 | UniProt (A0QSG0) Pfam (PF00467) Pfam (PF17136) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 45 | SA (W) | 50S ribosomal protein L25 | polymer | 192 | 20331.7 | 1 | UniProt (A0R3D2) Pfam (PF01386) Pfam (PF14693) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | General stress protein CTC |
| 46 | TA (X) | 50S ribosomal protein L27 | polymer | 79 | 8322.5 | 1 | UniProt (A0R150) Pfam (PF01016) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 47 | UA (Z) | 50S ribosomal protein L29 | polymer | 64 | 7590.6 | 1 | UniProt (A0QSD9) Pfam (PF00831) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 48 | VA (a) | 50S ribosomal protein L30 | polymer | 59 | 6761.8 | 1 | UniProt (A0QSG7) Pfam (PF00327) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 49 | WA (b) | 50S ribosomal protein L32 | polymer | 54 | 6050.1 | 1 | UniProt (A0R3I9) Pfam (PF01783) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 50 | XA (c) | 50S ribosomal protein L33 2 | polymer | 53 | 6484.4 | 1 | UniProt (A0R551) Pfam (PF00471) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 51 | YA (d) | 50S ribosomal protein L34 | polymer | 46 | 5391.4 | 1 | UniProt (A0R7K0) Pfam (PF00468) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 52 | ZA (e) | 50S ribosomal protein L35 | polymer | 63 | 7167.3 | 1 | UniProt (A0QYU7) Pfam (PF01632) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 53 | AB (f) | 50S ribosomal protein L36 | polymer | 37 | 4341.3 | 1 | UniProt (A0QSL4) Pfam (PF00444) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 54 | BB (g) | 50S ribosomal protein L31 | polymer | 82 | 9141.2 | 1 | UniProt (A0R554) Pfam (PF01197) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | |
| 55 | CB (y) | 50S ribosomal protein L28 | polymer | 77 | 8794.0 | 1 | Mycobacterium smegmatis str. MC2 155 | ||
| 56 | DB (3) | Uncharacterized protein | polymer | 23 | 2710.2 | 1 | UniProt (A0QTP4) | Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 56 |
| Total formula weight | 2238239.6 | |
| All* | Total formula weight | 2238239.6 |
