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6DZI

Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1h16S rRNApolymer1511490111.71GenBank (118168627)Mycobacterium smegmatis str. MC2 155
2jCONSERVED PROTEIN DOMAINpolymer324033.11Mycobacterium smegmatis str. MC2 155
3k30S ribosomal protein S3polymer20823617.21UniProt (A0QSD7)
Pfam (PF07650)
Pfam (PF00189)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
4l30S ribosomal protein S4polymer20023284.61UniProt (A0QSL7)
Pfam (PF00163)
Pfam (PF01479)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
5m30S ribosomal protein S5polymer18018481.41UniProt (A0QSG6)
Pfam (PF00333)
Pfam (PF03719)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
6n30S ribosomal protein S6polymer9610991.61UniProt (A0A0D6J3X3)
In PDB
Mycobacterium smegmatis
7p30S ribosomal protein S7polymer15517529.21UniProt (A0QS97)
Pfam (PF00177)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
8q30S ribosomal protein S8polymer13114361.41UniProt (A0QSG3)
Pfam (PF00410)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
9430S ribosomal protein S9polymer12614093.41UniProt (A0QSP9)
Pfam (PF00380)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
10s30S ribosomal protein S10polymer9911252.01UniProt (A0QSD0)
Pfam (PF00338)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
11t30S ribosomal protein S11polymer11512151.71UniProt (A0QSL6)
Pfam (PF00411)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
12u30S ribosomal protein S12polymer12213678.11UniProt (A0QS96)
Pfam (PF00164)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
13v30S ribosomal protein S13polymer11613374.51UniProt (A0QSL5)
Pfam (PF00416)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
14x30S ribosomal protein S15polymer8810236.91UniProt (A0QVQ3)
Pfam (PF00312)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
15z30S ribosomal protein S16polymer11312635.71UniProt (A0QV37)
Pfam (PF00886)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
16530S ribosomal protein S17polymer9410680.51UniProt (A0QSE0)
Pfam (PF00366)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
17630S ribosomal protein S19polymer829379.91UniProt (A0QSD5)
Pfam (PF00203)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
18730S ribosomal protein S20polymer859424.91UniProt (A0R102)
Pfam (PF01649)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
19830S ribosomal protein S2polymer22825576.51UniProt (A0QVB8)
Pfam (PF00318)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
20r30S ribosomal protein S18 1polymer849449.21UniProt (A0R549)
Pfam (PF01084)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
21YRibosome hibernation promoting factorpolymer10312238.91UniProt (A0QTK6)
Pfam (PF02482)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)HPF
22930S ribosomal protein S14polymer10011661.51UniProt (A0R550)
Pfam (PF00253)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
23A23 S rRNA (3119-MER)polymer31191011834.81GenBank (118168627)Mycobacterium smegmatis str. MC2 155
24B5S RNA (118-MER)polymer11838061.81GenBank (118168627)Mycobacterium smegmatis str. MC2 155
25C50S ribosomal protein L2polymer27530008.41UniProt (A0QSD4)
Pfam (PF00181)
Pfam (PF03947)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
26D50S ribosomal protein L3polymer21422621.91UniProt (A0QSD1)
Pfam (PF00297)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
27E50S ribosomal protein L4polymer20922346.31UniProt (A0QSD2)
Pfam (PF00573)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
28F50S ribosomal protein L5polymer18220588.71UniProt (A0QSG1)
Pfam (PF00281)
Pfam (PF00673)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
29G50S ribosomal protein L6polymer17619165.91UniProt (A0QSG4)
Pfam (PF00347)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
30H50S ribosomal protein L9polymer15115949.31UniProt (A0R7F6)
Pfam (PF01281)
Pfam (PF03948)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
31I50S ribosomal protein L10polymer12613095.01UniProt (A0QS62)
Pfam (PF00466)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
32J50S ribosomal protein L11polymer13314109.21UniProt (A0QS45)
Pfam (PF03946)
Pfam (PF00298)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
33K50S ribosomal protein L13polymer14616015.51UniProt (A0QSP8)
Pfam (PF00572)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
34L50S ribosomal protein L14polymer12213400.61UniProt (A0QSF9)
Pfam (PF00238)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
35M50S ribosomal protein L15polymer14515384.01UniProt (I7G436)
Pfam (PF00828)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
36N50S ribosomal protein L16polymer13615498.91UniProt (A0QSD8)
Pfam (PF00252)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
37O50S ribosomal protein L17polymer11813210.31UniProt (A0QSL9)
Pfam (PF01196)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
38P50S ribosomal protein L18polymer12613580.51UniProt (I7FGD9)
Pfam (PF00861)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
39Q50S ribosomal protein L19polymer11312892.81UniProt (A0QV42)
Pfam (PF01245)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
40R50S ribosomal protein L20polymer12414035.21UniProt (A0QYU6)
Pfam (PF00453)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
41S50S ribosomal protein L21polymer10010724.41UniProt (A0R151)
Pfam (PF00829)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
42T50S ribosomal protein L22polymer11412408.21UniProt (A0QSD6)
Pfam (PF00237)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
43U50S ribosomal protein L23polymer9710748.41UniProt (A0QSD3)
Pfam (PF00276)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
44V50S ribosomal protein L24polymer10511228.91UniProt (A0QSG0)
Pfam (PF00467)
Pfam (PF17136)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
45W50S ribosomal protein L25polymer19220331.71UniProt (A0R3D2)
Pfam (PF01386)
Pfam (PF14693)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)General stress protein CTC
46X50S ribosomal protein L27polymer798322.51UniProt (A0R150)
Pfam (PF01016)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
47Z50S ribosomal protein L29polymer647590.61UniProt (A0QSD9)
Pfam (PF00831)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
48a50S ribosomal protein L30polymer596761.81UniProt (A0QSG7)
Pfam (PF00327)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
49b50S ribosomal protein L32polymer546050.11UniProt (A0R3I9)
Pfam (PF01783)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
50c50S ribosomal protein L33 2polymer536484.41UniProt (A0R551)
Pfam (PF00471)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
51d50S ribosomal protein L34polymer465391.41UniProt (A0R7K0)
Pfam (PF00468)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
52e50S ribosomal protein L35polymer637167.31UniProt (A0QYU7)
Pfam (PF01632)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
53f50S ribosomal protein L36polymer374341.31UniProt (A0QSL4)
Pfam (PF00444)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
54g50S ribosomal protein L31polymer829141.21UniProt (A0R554)
Pfam (PF01197)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
55y50S ribosomal protein L28polymer778794.01Mycobacterium smegmatis str. MC2 155
563Uncharacterized proteinpolymer232710.21UniProt (A0QTP4)
In PDB
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains56
Total formula weight2238239.6
All*Total formula weight2238239.6
*Water molecules are not included.

218853

PDB entries from 2024-04-24

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