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6DZ3

Crystal structure of human 5'-deoxy-5'-methylthioadenosine phosphorylase in complex with (3R,4S)-1-((4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl)-4-(((3-(1-butyl-1H-1,2,3-triazol-4-yl)propyl)thio)methyl)pyrrolidin-3-ol

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
S-methyl-5'-thioadenosine phosphorylasepolymer29733119.13UniProt (Q13126)
Pfam (PF01048)
Homo sapiens (Human)5'-methylthioadenosine phosphorylase, MTAPase
2D, E, J, M, N
(A, B, C)
CHLORIDE IONnon-polymer35.55Chemie (CL)
3F, G, H, O, P...
(A, C)
1,2-ETHANEDIOLnon-polymer62.17Chemie (EDO)
4I, L, S
(A, B, C)
(3R,4S)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-({[3-(1-butyl-1H-1,2,3-triazol-4-yl)propyl]sulfanyl}methyl)pyrrolidin-3-olnon-polymer444.63Chemie (OS6)
5K
(B)
ACETIC ACIDnon-polymer60.11Chemie (ACY)
6T, U, V
(A, B, C)
waterwater18.0338Chemie (HOH)
Sequence modifications
A, B, C: 1 - 283 (UniProt: Q13126)
PDBExternal DatabaseDetails
Met -13-expression tag
His -12-expression tag
His -11-expression tag
His -10-expression tag
His -9-expression tag
His -8-expression tag
His -7-expression tag
Glu -6-expression tag
Asn -5-expression tag
Leu -4-expression tag
Tyr -3-expression tag
Phe -2-expression tag
Gln -1-expression tag
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight99357.2
Non-Polymers*Number of molecules16
Total formula weight2005.6
All*Total formula weight101362.7
*Water molecules are not included.

249697

PDB entries from 2026-02-25

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