6DXT
Structure of USP5 zinc-finger ubiquitin binding domain co-crystallized with 3-(5-phenyl-1,3,4-oxadiazol-2-yl)propanoate
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | Ubiquitin carboxyl-terminal hydrolase 5 | polymer | 121 | 13535.2 | 2 | UniProt (P45974) Pfam (PF02148) In PDB | Homo sapiens (Human) | Deubiquitinating enzyme 5,Isopeptidase T,Ubiquitin thioesterase 5,Ubiquitin-specific-processing protease 5 |
| 2 | A | 3-(5-phenyl-1,3,4-oxadiazol-2-yl)propanoic acid | non-polymer | 218.2 | 1 | Chemie (HHY) | |||
| 3 | A | UNKNOWN ATOM OR ION | non-polymer | 62.1 | 2 | Chemie (UNX) | |||
| 4 | A, B | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 5 | B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
| 6 | water | water | 18.0 | 170 | Chemie (HOH) |
Sequence modifications
A, B: 171 - 290 (UniProt: P45974)
| PDB | External Database | Details |
|---|---|---|
| Gly 170 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 27070.4 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 597.3 | |
| All* | Total formula weight | 27667.7 |
