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6DOI

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid (1.54 Angstrom wavelength): Soak in 0.5 mM EGTA and 200 mM K+ at 21 C

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Ribonuclease Hpolymer13315373.31UniProt (Q9KEI9)Bacillus halodurans C-125RNase H
2B
(B)
5'-R(*AP*CP*AP*U)-3' portion of intact RNA (5'-R(*AP*CP*AP*UP*CP*G)-3')polymer41224.81unidentified
3C
(b)
5'-R(P*CP*G)-3' portion of intact RNA (5'-R(*AP*CP*AP*UP*CP*G)-3')polymer2605.41unidentified
4D
(C)
DNA (5'-D(*CP*GP*AP*TP*GP*T)-3')polymer61824.21unidentified
5E, F, Q
(A, C)
POTASSIUM IONnon-polymer39.13Chemie (K)
6G
(A)
CALCIUM IONnon-polymer40.11Chemie (CA)
7H, I, J, K
(A)
IODIDE IONnon-polymer126.94Chemie (IOD)
8L, M, O, P
(A)
GLYCEROLnon-polymer92.14Chemie (GOL)
9N, R
(A, C)
1,2-ETHANEDIOLnon-polymer62.12Chemie (EDO)
10S, T, U, V
(A, B, b, C)
waterwater18.0164Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight19027.8
Non-Polymers*Number of molecules14
Total formula weight1157.5
All*Total formula weight20185.3
*Water molecules are not included.

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PDB entries from 2025-06-18

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