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6DO1

Structure of nanobody-stabilized angiotensin II type 1 receptor bound to S1I8

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Type-1 angiotensin II receptor,Soluble cytochrome b562 BRIL fusion proteinpolymer42548514.92UniProt (P30556)
UniProt (P0ABE7)
Pfam (PF00001)
Homo sapiens (Human)AT1AR,AT1BR,Angiotensin II type-1 receptor,AT1,Cytochrome b-562,AT1AR,AT1BR,Angiotensin II type-1 receptor,AT1
2C, D, E, F
(C, D, E, F)
Nanobody Nb.AT110i1polymer12613712.04synthetic construct
3G, H
(G, H)
Angiotensin-like peptide S1I8polymer8970.22synthetic construct
4I, O
(A, B)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.22Chemie (NAG)
5J, K, L, P, Q
(A, B)
CHLORIDE IONnon-polymer35.55Chemie (CL)
PubChem (312)
6M, N, R, S, T
(A, B)
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoatenon-polymer356.55Chemie (OLC)
PubChem (25021708)
PubChem (54294270)
PubChem (46840179)
PubChem (33022)
PubChem (54294271)
PubChem (5283468)
PubChem (5364833)
PubChem (11451146)
PubChem (12178130)
7AA, U, V, W, X...
(H, A, B, C, D...)
waterwater18.076Chemie (HOH)
Sequence modifications
A, B: 2 - 226 (UniProt: P30556)
PDBExternal DatabaseDetails
Asp -6-expression tag
Tyr -5-expression tag
Lys -4-expression tag
Asp -3-expression tag
Asp -2-expression tag
Asp -1-expression tag
Asp 0-expression tag
Lys 1-expression tag
A, B: 227 - 325 (UniProt: P0ABE7)
PDBExternal DatabaseDetails
TrpMet 29engineered mutation
A, B: 326 - 418 (UniProt: P30556)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight153818.1
Non-Polymers*Number of molecules12
Total formula weight2402.4
All*Total formula weight156220.5
*Water molecules are not included.

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PDB entries from 2026-05-20

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