Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6DMD

ppGpp Riboswitch bound to ppGpp, manganese chloride structure

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
ppGpp Riboswitchpolymer10233316.72Sulfobacillus acidophilus DSM 10332
2C, V
(A, B)
GUANOSINE-5',3'-TETRAPHOSPHATEnon-polymer603.22Chemie (G4P)
3D, E, F, G, H...
(A, B)
MANGANESE (II) IONnon-polymer54.910Chemie (MN)
4AA, BA, CA, J, K...
(B, A)
SODIUM IONnon-polymer23.08Chemie (NA)
5DA, EA, O, P, Q...
(B, A)
MAGNESIUM IONnon-polymer24.38Chemie (MG)
6U
(A)
POTASSIUM IONnon-polymer39.11Chemie (K)
7FA, GA
(A, B)
waterwater18.043Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight66633.4
Non-Polymers*Number of molecules29
Total formula weight2173.2
All*Total formula weight68806.5
*Water molecules are not included.

237423

PDB entries from 2025-06-11

PDB statisticsPDBj update infoContact PDBjnumon