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6DMC

ppGpp Riboswitch bound to ppGpp, native structure

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
ppGpp Riboswitchpolymer10233316.72Sulfobacillus acidophilus DSM 10332
2C, W
(A, B)
GUANOSINE-5',3'-TETRAPHOSPHATEnon-polymer603.22Chemie (G4P)
3AA, BA, CA, D, DA...
(B, A)
MAGNESIUM IONnon-polymer24.321Chemie (MG)
4GA, HA, IA, JA, P...
(B, A)
SODIUM IONnon-polymer23.010Chemie (NA)
5V
(A)
POTASSIUM IONnon-polymer39.11Chemie (K)
6KA, LA
(A, B)
waterwater18.0168Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight66633.4
Non-Polymers*Number of molecules34
Total formula weight1985.7
All*Total formula weight68619.1
*Water molecules are not included.

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PDB entries from 2025-11-05

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