6DJK
Structure of DNA polymerase III subunit beta from Rickettsia typhi in complex with a natural product
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Beta sliding clamp | polymer | 389 | 43902.8 | 1 | UniProt (Q68WW0) Pfam (PF00712) Pfam (PF02767) Pfam (PF02768) | Rickettsia typhi str. Wilmington | Sliding clamp,Beta-clamp processivity factor,DNA polymerase III beta sliding clamp subunit,DNA polymerase III subunit beta |
| 2 | B (B) | ACE-MVA-MP8-NZC-LEU-MP8-LEU-MVA-PRO-MLU-GLY | polymer | 11 | 1115.4 | 1 | BIRD (PRD_002311) | synthetic construct | |
| 3 | C, D (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
| 4 | E (A) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 5 | F, G (A, B) | water | water | 18.0 | 245 | Chemie (HOH) |
Sequence modifications
A: 1 - 381 (UniProt: Q68WW0)
| PDB | External Database | Details |
|---|---|---|
| Met -7 | - | initiating methionine |
| Ala -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| His -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 45018.2 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 230.3 | |
| All* | Total formula weight | 45248.5 |
