6DDD
Structure of the 50S ribosomal subunit from Methicillin Resistant Staphylococcus aureus in complex with the oxazolidinone antibiotic LZD-5
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 50S ribosomal protein L19 | polymer | 116 | 13392.8 | 1 | UniProt (A0A077UVB6) Pfam (PF01245) UniProt (by SIFTS) (Q2FZ42) | Staphylococcus aureus | |
| 2 | B (B) | 50S ribosomal protein L2 | polymer | 276 | 30088.0 | 1 | UniProt (B3VKN3) Pfam (PF00181) Pfam (PF03947) UniProt (by SIFTS) (P60430) | Staphylococcus aureus | |
| 3 | C (C) | 50S ribosomal protein L20 | polymer | 118 | 13720.3 | 1 | UniProt (A0A077VMP6) Pfam (PF00453) UniProt (by SIFTS) (Q2FXQ1) | Staphylococcus aureus | |
| 4 | D (D) | 50S ribosomal protein L21 | polymer | 102 | 11354.1 | 1 | UniProt (D7URR3) Pfam (PF00829) UniProt (by SIFTS) (Q2FXS8) | Staphylococcus aureus | |
| 5 | E (E) | 50S ribosomal protein L22 | polymer | 116 | 12786.8 | 1 | UniProt (A0A077UKF9) Pfam (PF00237) UniProt (by SIFTS) (Q2FW11) | Staphylococcus aureus | |
| 6 | F (F) | 50S ribosomal protein L23 | polymer | 91 | 10625.4 | 1 | UniProt (W8TUB4) Pfam (PF00276) UniProt (by SIFTS) (Q2FW08) | Staphylococcus aureus | |
| 7 | G (G) | 50S ribosomal protein L24 | polymer | 105 | 11561.5 | 1 | UniProt (W8TRD5) Pfam (PF00467) Pfam (PF17136) UniProt (by SIFTS) (Q2FW17) | Staphylococcus aureus | |
| 8 | H (H) | 50S ribosomal protein L25 | polymer | 217 | 23810.6 | 1 | UniProt (A0A133Q8Z9) UniProt (by SIFTS) (P0A0F8) | Staphylococcus aureus | General stress protein CTC |
| 9 | I (I) | 50S ribosomal protein L27 | polymer | 85 | 9198.4 | 1 | UniProt (A0A077ULC5) Pfam (PF01016) UniProt (by SIFTS) (Q2FXT0) | Staphylococcus aureus | |
| 10 | J (J) | 50S ribosomal protein L28 | polymer | 62 | 6995.3 | 1 | UniProt (A0A077URJ8) Pfam (PF00830) UniProt (by SIFTS) (Q2FZ60) | Staphylococcus aureus | |
| 11 | K (K) | 50S ribosomal protein L29 | polymer | 69 | 8105.3 | 1 | UniProt (A0A077W1J5) Pfam (PF00831) UniProt (by SIFTS) (Q2FW14) | Staphylococcus aureus | |
| 12 | L (L) | 50S ribosomal protein L3 | polymer | 217 | 23459.9 | 1 | UniProt (W8U3W0) Pfam (PF00297) UniProt (by SIFTS) (Q2FW06) | Staphylococcus aureus | |
| 13 | M (M) | 50S ribosomal protein L30 | polymer | 59 | 6565.7 | 1 | UniProt (W8UVN7) Pfam (PF00327) UniProt (by SIFTS) (P0A0G2) | Staphylococcus aureus | |
| 14 | N (N) | 50S ribosomal protein L32 | polymer | 57 | 6500.6 | 1 | UniProt (A0A077UWR7) Pfam (PF01783) UniProt (by SIFTS) (Q2FZF1) | Staphylococcus aureus | |
| 15 | O (O) | 50S ribosomal protein L33 | polymer | 49 | 5885.8 | 1 | UniProt (A0A077UXT4) Pfam (PF00471) UniProt (by SIFTS) (Q2FY22) | Staphylococcus aureus | |
| 16 | P (P) | 50S ribosomal protein L34 | polymer | 50 | 6064.4 | 1 | UniProt (T1YD75) | Staphylococcus aureus | |
| 17 | Q (Q) | 50S ribosomal protein L35 | polymer | 65 | 7593.2 | 1 | UniProt (A0A077UL47) Pfam (PF01632) UniProt (by SIFTS) (Q2FXQ0) | Staphylococcus aureus | |
| 18 | R (R) | 50S ribosomal protein L36 | polymer | 37 | 4318.4 | 1 | UniProt (A0A077UGV8) Pfam (PF00444) UniProt (by SIFTS) (Q2FW29) | Staphylococcus aureus | |
| 19 | S (S) | 50S ribosomal protein L4 | polymer | 207 | 22523.8 | 1 | UniProt (A0A166DK89) Pfam (PF00573) UniProt (by SIFTS) (Q2FW07) | Staphylococcus aureus | |
| 20 | T (V) | 50S ribosomal protein L13 | polymer | 145 | 16359.4 | 1 | UniProt (W8TUE6) Pfam (PF00572) UniProt (by SIFTS) (Q2FW38) | Staphylococcus aureus | |
| 21 | U (W) | 50S ribosomal protein L14 | polymer | 122 | 13157.3 | 1 | UniProt (A0A077UUA0) Pfam (PF00238) UniProt (by SIFTS) (Q2FW16) | Staphylococcus aureus | |
| 22 | V (X) | 50S ribosomal protein L15 | polymer | 146 | 15628.9 | 1 | UniProt (A0A077UGA7) Pfam (PF00828) UniProt (by SIFTS) (P0A0F8) | Staphylococcus aureus | |
| 23 | W (Y) | 50S ribosomal protein L16 | polymer | 144 | 16274.0 | 1 | UniProt (A0A077V4G0) Pfam (PF00252) UniProt (by SIFTS) (Q2FW13) | Staphylococcus aureus | |
| 24 | X (Z) | 50S ribosomal protein L17 | polymer | 122 | 13771.8 | 1 | UniProt (A0A077UG91) Pfam (PF01196) UniProt (by SIFTS) (Q2FW33) | Staphylococcus aureus | |
| 25 | Y (a) | 50S ribosomal protein L18 | polymer | 119 | 13124.1 | 1 | UniProt (W8TRE0) Pfam (PF00861) UniProt (by SIFTS) (Q2FW22) | Staphylococcus aureus | |
| 26 | Z (1) | 23S rRNA | polymer | 2923 | 946696.6 | 1 | GenBank (1269117575) | Staphylococcus aureus | |
| 27 | AA (2) | 5S rRNA | polymer | 115 | 36974.9 | 1 | GenBank (1333434557) | Staphylococcus aureus | |
| 28 | BA (1) | 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide | non-polymer | 406.2 | 1 | Chemie (G6V) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 27 |
| Total formula weight | 1306537.3 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 406.2 | |
| All* | Total formula weight | 1306943.5 |
