6DBZ
Crystal structure of Nudix 1 from Arabidopsis thaliana complexed with isopentenyl diphosphate
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | Nudix hydrolase 1 | polymer | 150 | 16655.8 | 2 | UniProt (Q9CA40) Pfam (PF00293) In PDB | Arabidopsis thaliana (Mouse-ear cress) | AtNUDT1,7,8-dihydro-8-oxoguanine-triphosphatase,8-oxo-dGTP diphosphatase,8-oxo-dGTPase,Dihydroneopterin triphosphate diphosphatase,Dihydroneopterin triphosphate pyrophosphohydrolase,DHNTP pyrophosphohydrolase,NADH pyrophosphatase |
| 2 | A, B | ISOPENTYL PYROPHOSPHATE | non-polymer | 248.1 | 2 | Chemie (IPR) | |||
| 3 | A, B | MAGNESIUM ION | non-polymer | 24.3 | 7 | Chemie (MG) | |||
| 4 | water | water | 18.0 | 192 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 147 (UniProt: Q9CA40)
| PDB | External Database | Details |
|---|---|---|
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 33311.7 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 666.4 | |
| All* | Total formula weight | 33978.0 |
