6D1V
Crystal structure of E. coli RppH-DapF complex, monomer bound to RNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Diaminopimelate epimerase | polymer | 275 | 30332.6 | 1 | UniProt (P0A6K1) Pfam (PF01678) | Escherichia coli | |
| 2 | B (B) | RNA pyrophosphohydrolase | polymer | 160 | 18894.7 | 1 | UniProt (P0A776) Pfam (PF00293) | Escherichia coli | (Di)nucleoside polyphosphate hydrolase,Ap5A pyrophosphatase |
| 3 | C (C) | RNA (5'-D(*(APC))-R(P*GP*U)-3') | polymer | 3 | 1093.6 | 1 | Escherichia coli | ||
| 4 | D, E, F, G, N... (A, B) | GLYCEROL | non-polymer | 92.1 | 7 | Chemie (GOL) | |||
| 5 | H, I, J, Q, R (A, B) | CHLORIDE ION | non-polymer | 35.5 | 5 | Chemie (CL) | |||
| 6 | K, L, M (B) | MAGNESIUM ION | non-polymer | 24.3 | 3 | Chemie (MG) | |||
| 7 | S, T, U (A, B, C) | water | water | 18.0 | 288 | Chemie (HOH) |
Sequence modifications
A: 1 - 274 (UniProt: P0A6K1)
B: 1 - 159 (UniProt: P0A776)
| PDB | External Database | Details |
|---|---|---|
| Ser 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ser 0 | - | expression tag |
| Ala 159 | Gln 159 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 50320.9 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 894.8 | |
| All* | Total formula weight | 51215.8 |
