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6CRB

Ternary complex crystal structure of DNA polymerase Beta with a dideoxy terminated primer with CF2, beta, gamma dATP analogue

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA polymerase betapolymer33538241.71UniProt (P06746)
Pfam (PF14716)
Pfam (PF10391)
Pfam (PF14792)
Pfam (PF14791)
Homo sapiens (Human)
2B
(T)
Template Strandpolymer164844.11Homo sapiens
3C
(P)
Primer Strandpolymer103061.01Homo sapiens
4D
(D)
Downstream Primer Strandpolymer51536.01Homo sapiens
5E
(A)
9-{2-deoxy-5-O-[(S)-{[(S)-[difluoro(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]-alpha-D-erythro-pentofuranosyl}-9H-purin-6-aminenon-polymer525.21Chemie (VA6)
6F
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
7G, H, I
(A)
SODIUM IONnon-polymer23.03Chemie (NA)
8J, K, L, M
(A, T, P, D)
waterwater18.0175Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight47682.9
Non-Polymers*Number of molecules5
Total formula weight618.5
All*Total formula weight48301.3
*Water molecules are not included.

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PDB entries from 2025-06-11

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