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6CFO

HUMAN PYRUVATE DEHYDROGENASE E1 COMPONENT COMPLEX WITH COVALENT TDP ADDUCT ACETYL PHOSPHINATE

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, C)
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrialpolymer36540714.52UniProt (P08559)
Pfam (PF00676)
Homo sapiens (Human)PDHE1-A type I
2B, D
(B, D)
Pyruvate dehydrogenase E1 component subunit beta, mitochondrialpolymer34137346.82UniProt (P11177)
Pfam (PF02779)
Pfam (PF02780)
Homo sapiens (Human)PDHE1-B
3E, G
(A, C)
3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-{(1S)-1-hydroxy-1-[(R)-hydroxy(oxo)-lambda~5~-phosphanyl]ethyl}-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-iumnon-polymer533.32Chemie (A5X)
4F, H
(A, C)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
5I, J, K, L
(A, B, C, D)
waterwater18.0375Chemie (HOH)
Sequence modifications
A, C: 1 - 361 (UniProt: P08559)
PDBExternal DatabaseDetails
Met -3-initiating methionine
Arg -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
B, D: 1 - 329 (UniProt: P11177)
PDBExternal DatabaseDetails
Met -11-initiating methionine
Arg -10-expression tag
Gly -9-expression tag
Ser -8-expression tag
His -7-expression tag
His -6-expression tag
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight156122.6
Non-Polymers*Number of molecules4
Total formula weight1115.3
All*Total formula weight157238.0
*Water molecules are not included.

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PDB entries from 2025-06-18

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