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6CFO

HUMAN PYRUVATE DEHYDROGENASE E1 COMPONENT COMPLEX WITH COVALENT TDP ADDUCT ACETYL PHOSPHINATE

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, CPyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrialpolymer36540714.52UniProt (P08559)
Pfam (PF00676)
In PDB
Homo sapiens (Human)PDHE1-A type I
2B, DPyruvate dehydrogenase E1 component subunit beta, mitochondrialpolymer34137346.82UniProt (P11177)
Pfam (PF02779)
Pfam (PF02780)
In PDB
Homo sapiens (Human)PDHE1-B
3A, C3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-{(1S)-1-hydroxy-1-[(R)-hydroxy(oxo)-lambda~5~-phosphanyl]ethyl}-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-iumnon-polymer533.32Chemie (A5X)
4A, CMAGNESIUM IONnon-polymer24.32Chemie (MG)
5waterwater18.0375Chemie (HOH)
Sequence modifications
A, C: 1 - 361 (UniProt: P08559)
PDBExternal DatabaseDetails
Met -3-initiating methionine
Arg -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
B, D: 1 - 329 (UniProt: P11177)
PDBExternal DatabaseDetails
Met -11-initiating methionine
Arg -10-expression tag
Gly -9-expression tag
Ser -8-expression tag
His -7-expression tag
His -6-expression tag
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight156122.6
Non-Polymers*Number of molecules4
Total formula weight1115.3
All*Total formula weight157238.0
*Water molecules are not included.

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PDB entries from 2024-09-18

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