6C6Q
Crystal Structure of the Murine Norovirus VP1 P Domain in complex with the CD300lf Receptor
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Capsid protein VP1 | polymer | 303 | 32963.1 | 2 | UniProt (Q80J94) Pfam (PF08435) | Murine norovirus 1 | |
| 2 | C, D (D, F) | CMRF35-like molecule 1 | polymer | 113 | 12786.5 | 2 | UniProt (Q6SJQ7) Pfam (PF07686) | Mus musculus (Mouse) | CLM-1, CD300 antigen-like family member F, Leukocyte mono-Ig-like receptor 3, Myeloid-associated immunoglobulin-like receptor 5, MAIR-V |
| 3 | AA, BA, CA, E, EA... (D, A, F, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 22 | Chemie (EDO) | |||
| 4 | L, M (A) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
| 5 | DA, HA, N, O, V... (D, F, A, B) | MAGNESIUM ION | non-polymer | 24.3 | 6 | Chemie (MG) | |||
| 6 | IA, JA, KA, LA (A, B, D, F) | water | water | 18.0 | 728 | Chemie (HOH) |
Sequence modifications
D, F: 1 - 112 (UniProt: Q6SJQ7)
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 91499.3 | |
| Non-Polymers* | Number of molecules | 30 |
| Total formula weight | 1582.2 | |
| All* | Total formula weight | 93081.5 |
