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6C6Q

Crystal Structure of the Murine Norovirus VP1 P Domain in complex with the CD300lf Receptor

Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue EDO A 601
ChainResidue
AASN464
AALA465

site_idAC2
Number of Residues7
Detailsbinding site for residue EDO A 602
ChainResidue
ASER284
ACYS288
AARG392
AVAL394
AEDO605
AHOH703
BPRO246

site_idAC3
Number of Residues1
Detailsbinding site for residue EDO A 603
ChainResidue
AHOH830

site_idAC4
Number of Residues3
Detailsbinding site for residue EDO A 604
ChainResidue
ATYR399
AHOH706
AHOH748

site_idAC5
Number of Residues7
Detailsbinding site for residue EDO A 605
ChainResidue
AGLU338
AVAL394
APRO395
AEDO602
AHOH815
BGLU338
BPRO395

site_idAC6
Number of Residues2
Detailsbinding site for residue EDO A 606
ChainResidue
AARG238
AHOH874

site_idAC7
Number of Residues2
Detailsbinding site for residue EDO A 607
ChainResidue
ALEU275
AASP321

site_idAC8
Number of Residues3
Detailsbinding site for residue CL A 608
ChainResidue
AARG392
AHOH848
BARG437

site_idAC9
Number of Residues5
Detailsbinding site for residue CL A 609
ChainResidue
AARG437
AHOH787
AHOH890
BARG392
BHOH780

site_idAD1
Number of Residues6
Detailsbinding site for residue MG A 610
ChainResidue
AASP366
AASP410
AHOH739
AHOH763
AHOH826
AHOH871

site_idAD2
Number of Residues6
Detailsbinding site for residue MG A 611
ChainResidue
AGLN438
AASP440
AHOH732
AHOH757
AHOH768
AHOH830

site_idAD3
Number of Residues4
Detailsbinding site for residue EDO B 601
ChainResidue
BMET229
BASP231
BASN464
BHOH781

site_idAD4
Number of Residues2
Detailsbinding site for residue EDO B 602
ChainResidue
BHOH783
BHOH874

site_idAD5
Number of Residues4
Detailsbinding site for residue EDO B 603
ChainResidue
AARG396
BTHR353
BTHR354
BVAL378

site_idAD6
Number of Residues4
Detailsbinding site for residue EDO B 604
ChainResidue
BGLY300
BTHR301
BGLY302
BALA380

site_idAD7
Number of Residues5
Detailsbinding site for residue EDO B 605
ChainResidue
BGLY400
BHOH798
BHOH812
BHOH830
DVAL39

site_idAD8
Number of Residues7
Detailsbinding site for residue EDO B 606
ChainResidue
AGLU456
ASER459
ATRP460
BGLU456
BSER459
BTRP460
BHOH702

site_idAD9
Number of Residues6
Detailsbinding site for residue MG B 607
ChainResidue
BASP366
BASP410
BHOH760
BHOH771
BHOH843
BHOH878

site_idAE1
Number of Residues6
Detailsbinding site for residue MG B 608
ChainResidue
BGLN438
BASP440
BHOH747
BHOH758
BHOH776
BHOH801

site_idAE2
Number of Residues6
Detailsbinding site for residue EDO D 201
ChainResidue
BTHR362
BTHR363
BASN364
DCYS36
DCYS44
DTHR46

site_idAE3
Number of Residues2
Detailsbinding site for residue EDO D 202
ChainResidue
DTYR31
DHOH327

site_idAE4
Number of Residues8
Detailsbinding site for residue EDO D 203
ChainResidue
DGLN37
DGLY38
DSER83
DALA85
DILE87
DTYR88
DHOH337
DHOH338

site_idAE5
Number of Residues3
Detailsbinding site for residue EDO D 204
ChainResidue
DTHR46
DLYS59
DLYS45

site_idAE6
Number of Residues5
Detailsbinding site for residue EDO D 205
ChainResidue
BGLY300
DGLN41
DARG42
DMET100
DHOH303

site_idAE7
Number of Residues4
Detailsbinding site for residue EDO D 206
ChainResidue
APRO425
DHOH310
DHOH332
DHOH349

site_idAE8
Number of Residues6
Detailsbinding site for residue MG D 207
ChainResidue
BASN364
BASP366
BHOH899
DLYS94
DGLY96
DASP98

site_idAE9
Number of Residues7
Detailsbinding site for residue EDO F 201
ChainResidue
BPRO522
FGLY12
FGLN13
FGLY16
FSER17
FLEU80
FHOH321

site_idAF1
Number of Residues6
Detailsbinding site for residue EDO F 202
ChainResidue
ASER377
AHOH747
FGLN41
FARG42
FHOH301
FHOH320

site_idAF2
Number of Residues4
Detailsbinding site for residue EDO F 203
ChainResidue
FTHR104
FVAL105
FASN106
FHOH305

site_idAF3
Number of Residues6
Detailsbinding site for residue MG F 204
ChainResidue
AASN364
AASP366
AHOH896
FLYS94
FGLY96
FASP98

223166

PDB entries from 2024-07-31

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