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6C2N

Crystal structure of HCV NS3/4A double mutant variant Y56H/D168A in complex with danoprevir

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
NS4A COFACTOR-NS3 PROTEIN CHIMERApolymer20321434.31UniProt (A8DG50)
Pfam (PF02907)
Hepatitis C virus subtype 1a
2B
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
3C
(A)
SULFATE IONnon-polymer96.11Chemie (SO4)
4D
(A)
(2R,6S,12Z,13aS,14aR,16aS)-6-[(tert-butoxycarbonyl)amino]-14a-[(cyclopropylsulfonyl)carbamoyl]-5,16-dioxo-1,2,3,5,6,7,8 ,9,10,11,13a,14,14a,15,16,16a-hexadecahydrocyclopropa[e]pyrrolo[1,2-a][1,4]diazacyclopentadecin-2-yl 4-fluoro-2H-isoindole-2-carboxylatenon-polymer729.81Chemie (TSV)
5E
(A)
waterwater18.0198Chemie (HOH)
Sequence modifications
A: 990 - 1000 (UniProt: A8DG50)
PDBExternal DatabaseDetails
Gly 980-expression tag
Ser 981-expression tag
His 982-expression tag
Met 983-expression tag
Ala 984-expression tag
Ser 985-expression tag
Met 986-expression tag
Lys 987-expression tag
Lys 988-expression tag
Lys 989-expression tag
Ser 991Cys 1679engineered mutation
Ile 998Val 1686engineered mutation
Asn 999Ile 1687engineered mutation
A: 1003 - 1182 (UniProt: A8DG50)
PDBExternal DatabaseDetails
Ser 1001-linker
Gly 1002-linker
Asp 1003Ile 1029engineered mutation
Glu 1013Leu 1039engineered mutation
Glu 1014Leu 1040engineered mutation
Gln 1017Ile 1043engineered mutation
Glu 1018Ile 1044engineered mutation
Gln 1021Leu 1047engineered mutation
Thr 1040Ala 1066engineered mutation
Ser 1047Cys 1073engineered mutation
Leu 1052Cys 1078engineered mutation
His 1056Tyr 1082engineered mutation
Thr 1072Ile 1098engineered mutation
Gln 1086Pro 1112engineered mutation
Ser 1159Cys 1185engineered mutation
Ala 1168Asp 1194engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight21434.3
Non-Polymers*Number of molecules3
Total formula weight891.3
All*Total formula weight22325.6
*Water molecules are not included.

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PDB entries from 2025-06-11

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