6C09
Ternary crystal structure of the 3C8 TCR-CD1c-monoacylglycerol complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | T-cell surface glycoprotein CD1c | polymer | 287 | 32283.1 | 1 | UniProt (P29017) Pfam (PF16497) Pfam (PF07654) In PDB | Homo sapiens (Human) | |
2 | B | Beta-2-microglobulin | polymer | 108 | 12646.2 | 1 | UniProt (P61769) Pfam (PF07654) In PDB | Homo sapiens (Human) | |
3 | C | 3C8 T cell receptor alpha-chain | polymer | 205 | 22947.7 | 1 | Homo sapiens | ||
4 | D | 3C8 T cell receptor beta-chain | polymer | 247 | 27587.6 | 1 | Homo sapiens | ||
5 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
6 | A | (2R)-2,3-dihydroxypropyl hexadecanoate | non-polymer | 330.5 | 1 | Chemie (EKG) | |||
7 | A | DECANE | non-polymer | 142.3 | 2 | Chemie (D10) | |||
8 | A, D | POTASSIUM ION | non-polymer | 39.1 | 3 | Chemie (K) | |||
9 | C | 1,2-ETHANEDIOL | non-polymer | 62.1 | 3 | Chemie (EDO) | |||
10 | C | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
11 | water | water | 18.0 | 13 | Chemie (HOH) |
Sequence modifications
A: 1 - 279 (UniProt: P29017)
B: 1 - 99 (UniProt: P61769)
PDB | External Database | Details |
---|---|---|
Glu -2 | - | expression tag |
Thr -1 | - | expression tag |
Gly 0 | - | expression tag |
Ser 280 | - | expression tag |
Leu 281 | - | expression tag |
Val 282 | - | expression tag |
Pro 283 | - | expression tag |
Arg 284 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Glu -2 | - | expression tag |
Thr -1 | - | expression tag |
Gly 0 | - | expression tag |
Gly 100 | - | expression tag |
Ser 101 | - | expression tag |
Leu 102 | - | expression tag |
Val 103 | - | expression tag |
Pro 104 | - | expression tag |
Arg 105 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 95464.5 | |
Non-Polymers* | Number of molecules | 11 |
Total formula weight | 1245.9 | |
All* | Total formula weight | 96710.4 |