6BUV
Structure of Mycobacterium tuberculosis NadD in complex with inhibitor [(1~{R},2~{R},5~{S})-5-methyl-2-propan-2-yl-cyclohexyl] 2-[3-methyl-2-(phenoxymethyl)benzimidazol-1-yl]ethanoate
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B (A, B) | nicotinate mononucleotide adenylyltransferase NadD | polymer | 201 | 22352.3 | 2 | UniProt (P9WJJ5) Pfam (PF01467) | Mycobacterium tuberculosis | Deamido-NAD(+) diphosphorylase, Deamido-NAD(+) pyrophosphorylase, Nicotinate mononucleotide adenylyltransferase, NaMN adenylyltransferase |
2 | C (A) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
3 | D, E, F, H, I (A, B) | CHLORIDE ION | non-polymer | 35.5 | 5 | Chemie (CL) | |||
4 | G (B) | 1-methyl-3-(2-{[(1R,2R,5S)-5-methyl-2-(propan-2-yl)cyclohexyl]oxy}-2-oxoethyl)-2-(phenoxymethyl)-1H-1,3-benzimidazol-3-ium | non-polymer | 435.6 | 1 | Chemie (E9A) | |||
5 | J, K (A, B) | water | water | 18.0 | 296 | Chemie (HOH) |
Sequence modifications
A, B: 0 - 8 (PDB: 6BUV)
A, B: 9 - 200 (UniProt: P9WJJ5)
A, B: 9 - 200 (UniProt: P9WJJ5)
PDB | External Database | Details |
---|---|---|
Arg 196 | Cys 188 | engineered mutation |
Thr 200 | Cys 192 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 44704.6 | |
Non-Polymers* | Number of molecules | 7 |
Total formula weight | 635.8 | |
All* | Total formula weight | 45340.4 |