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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

6BOK

E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, DB16S ribosomal RNApolymer1507489561.22GenBank (46197919)Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
2B, EB23S ribosomal RNApolymer2880936785.62GenBank (46197919)Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
3C, FB5S ribosomal RNApolymer12038882.22GenBank (46197919)Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
4D, IA, GB, LC16S ribosomal RNApolymer7724846.94Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
5E, HB50S ribosomal protein L2polymer27530401.42UniProt (Q72I07)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
6F, IB50S ribosomal protein L3polymer20622450.22UniProt (Q72I04)
Pfam (PF00297)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
7G, JB50S ribosomal protein L4polymer20522744.32UniProt (Q72I05)
Pfam (PF00573)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
8H, KB50S ribosomal protein L5polymer18221075.62UniProt (Q72I16)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
9I, LB50S ribosomal protein L6polymer18019568.92UniProt (Q72I19)
Pfam (PF00347)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
10J, MB50S ribosomal protein L9polymer14816436.22UniProt (Q72GV5)
Pfam (PF01281)
Pfam (PF03948)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
11K, NB50S ribosomal protein L13polymer14015927.92UniProt (Q72IN1)
Pfam (PF00572)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
12L, OB50S ribosomal protein L14polymer12213309.62UniProt (Q72I14)
Pfam (PF00238)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
13M, PB50S ribosomal protein L15polymer15016319.12UniProt (Q72I23)
Pfam (PF00828)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
14N, QB50S ribosomal protein L16polymer14115977.92UniProt (Q72I11)
Pfam (PF00252)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
15O, RB50S ribosomal protein L17polymer11813750.12UniProt (Q72I33)
Pfam (PF01196)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
16P, SB50S ribosomal protein L18polymer11212639.82UniProt (Q72I20)
Pfam (PF00861)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
17Q, TB50S ribosomal protein L19polymer14617217.92UniProt (Q72JU9)
Pfam (PF01245)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
18R, UB50S ribosomal protein L20polymer11813779.32UniProt (Q72L76)
Pfam (PF00453)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
19S, VB50S ribosomal protein L21polymer10111069.22UniProt (Q72HR2)
Pfam (PF00829)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
20T, WB50S ribosomal protein L22polymer11312808.12UniProt (Q72I09)
Pfam (PF00237)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
21U, XB50S ribosomal protein L23polymer9610759.82UniProt (Q72I06)
Pfam (PF00276)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
22V, YB50S ribosomal protein L24polymer11012085.62UniProt (Q72I15)
Pfam (PF00467)
Pfam (PF17136)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
23W, ZB50S ribosomal protein L25polymer20623238.62UniProt (Q72IA7)
Pfam (PF01386)
Pfam (PF14693)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)General stress protein CTC
24X, AC50S ribosomal protein L27polymer859529.12UniProt (Q72HR3)
Pfam (PF01016)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
25Y, BC50S ribosomal protein L28polymer9811032.22UniProt (Q72G84)
Pfam (PF00830)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
26Z, CC50S ribosomal protein L29polymer728670.32UniProt (Q72I12)
Pfam (PF00831)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
27AA, DC50S ribosomal protein L30polymer606799.12UniProt (Q72I22)
Pfam (PF00327)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
28BA, EC50S ribosomal protein L31polymer718300.52UniProt (Q72JR0)
Pfam (PF01197)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
29CA, FC50S ribosomal protein L32polymer606734.12UniProt (P62652)
Pfam (PF01783)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
30DA, GC50S ribosomal protein L33polymer546632.92UniProt (Q72GW3)
Pfam (PF00471)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
31EA, HC50S ribosomal protein L34polymer496132.42Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
32FA, IC50S ribosomal protein L35polymer657506.22UniProt (Q72L77)
Pfam (PF01632)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
33GA, JC50S ribosomal protein L36polymer374435.42UniProt (Q72I28)
Pfam (PF00444)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
34HA, KCmRNApolymer278862.52synthetic construct
35JA, MC30S ribosomal protein S2polymer25629317.72UniProt (P62662)
Pfam (PF00318)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
36KA, NC30S ribosomal protein S3polymer23926751.12UniProt (P62663)
Pfam (PF07650)
Pfam (PF00189)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
37LA, OC30S ribosomal protein S4polymer20924373.42UniProt (P62664)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
38MA, PC30S ribosomal protein S5polymer16217583.42UniProt (P62665)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
39NA, QC30S ribosomal protein S6polymer10111988.82UniProt (P62666)
Pfam (PF01250)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
40OA, RC30S ribosomal protein S7polymer15618051.02UniProt (P62667)
Pfam (PF00177)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
41PA, SC30S ribosomal protein S8polymer13815868.62UniProt (P62668)
Pfam (PF00410)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
42QA, TC30S ribosomal protein S9polymer12814429.72UniProt (P62669)
Pfam (PF00380)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
43RA, UC30S ribosomal protein S10polymer10511955.02UniProt (P62653)
Pfam (PF00338)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
44SA, VC30S ribosomal protein S11polymer12913737.92UniProt (P62654)
Pfam (PF00411)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
45TA, WC30S ribosomal protein S12polymer13214683.52UniProt (P61941)
Pfam (PF00164)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
46UA, XC30S ribosomal protein S13polymer12614338.92UniProt (P62655)
Pfam (PF00416)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
47VA, YC30S ribosomal protein S14 type Zpolymer617158.72UniProt (P62656)
Pfam (PF00253)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
48WA, ZC30S ribosomal protein S15polymer8910578.42UniProt (P62657)
Pfam (PF00312)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
49XA, AD30S ribosomal protein S16polymer8810410.02UniProt (P62238)
Pfam (PF00886)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
50YA, BD30S ribosomal protein S17polymer10512324.72UniProt (P62658)
Pfam (PF00366)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
51ZA, CD30S ribosomal protein S18polymer8810258.32UniProt (P62659)
Pfam (PF01084)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
52AB, DD30S ribosomal protein S19polymer9310605.52UniProt (P62660)
Pfam (PF00203)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
53BB, ED30S ribosomal protein S20polymer10611722.12UniProt (P62661)
Pfam (PF01649)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
54CB, FD30S ribosomal protein Thxpolymer273350.02UniProt (P62613)
Pfam (PF17070)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
55GD, HDPeptide chain release factor 1polymer36541285.12UniProt (B7MKB3)
Pfam (PF03462)
Pfam (PF00472)
UniProt (by SIFTS) (P0A7I0)
In PDB		Escherichia coliRF-1
56B, EB, A, C, J...MAGNESIUM IONnon-polymer24.31518Chemie (MG)
57EC, FC, GC, BA, V...ZINC IONnon-polymer65.410Chemie (ZN)
Sequence modifications
B, EB: 6 - 2897 (GenBank: 46197919)
PDBExternal DatabaseDetails
C 154Unk 1534643conflict
X, AC: 1 - 85 (UniProt: Q72HR3)
PDBExternal DatabaseDetails
Arg 11Lys 11conflict
GD, HD: 1 - 360 (UniProt: B7MKB3)
PDBExternal DatabaseDetails
-Asp 302deletion
-Arg 303deletion
-Ser 304deletion
Leu 361-expression tag
Glu 362-expression tag
His 363-expression tag
His 364-expression tag
His 365-expression tag
His 366-expression tag
His 367-expression tag
His 368-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains112
Total formula weight4503777.0
Non-Polymers*Number of molecules1528
Total formula weight37549.1
All*Total formula weight4541326.1
*Water molecules are not included.

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PDB entries from 2024-07-31

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