6BMK
Crystal structure of MHC-I like protein
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | Antigen-presenting glycoprotein CD1d2 | polymer | 276 | 31484.4 | 2 | UniProt (P11610) Pfam (PF16497) Pfam (PF07654) | Mus musculus (Mouse) | |
| 2 | B, D (B, D) | Beta-2-microglobulin | polymer | 99 | 11660.4 | 2 | UniProt (P01887) Pfam (PF07654) | Mus musculus (Mouse) | |
| 3 | E, F (E, F) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
| 4 | G, I (A, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
| 5 | H, J (A, C) | (2R)-1-(decanoyloxy)-3-(phosphonooxy)propan-2-yl octadecanoate | non-polymer | 592.8 | 2 | Chemie (F57) | |||
| 6 | K, L, M, N (A, B, C, D) | water | water | 18.0 | 64 | Chemie (HOH) |
Sequence modifications
A, C: 4 - 279 (UniProt: P11610)
| PDB | External Database | Details |
|---|---|---|
| Ile 46 | Thr 64 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 86289.6 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 848.8 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 1628.0 | |
| All* | Total formula weight | 88766.3 |
