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6B88

E. coli LepB in complex with GNE0775 ((4S,7S,10S)-10-((S)-4-amino-2-(2-(4-(tert-butyl)phenyl)-4-methylpyrimidine-5-carboxamido)-N-methylbutanamido)-16,26-bis(2-aminoethoxy)-N-(2-iminoethyl)-7-methyl-6,9-dioxo-5,8-diaza-1,2(1,3)-dibenzenacyclodecaphane-4-carboxamide)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Signal peptidase Ipolymer24727736.32UniProt (P00803)
Pfam (PF10502)
Escherichia coli (strain K12)SPase I,Leader peptidase I
2C, E
(A, B)
(8S,11S,14S)-14-{[(2S)-4-amino-2-{[2-(4-tert-butylphenyl)-4-methylpyrimidine-5-carbonyl]amino}butanoyl](methyl)amino}-3,18-bis(2-aminoethoxy)-N-[(2Z)-2-iminoethyl]-11-methyl-10,13-dioxo-9,12-diazatricyclo[13.3.1.1~2,6~]icosa-1(19),2(20),3,5,15,17-hexaene-8-carboxamidenon-polymer892.12Chemie (CZD)
3D
(B)
PENTAETHYLENE GLYCOLnon-polymer238.31Chemie (1PE)
4F, G
(A, B)
waterwater18.099Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight55472.7
Non-Polymers*Number of molecules3
Total formula weight2022.4
All*Total formula weight57495.1
*Water molecules are not included.

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PDB entries from 2025-07-16

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