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6A6A

VanYB in complex with D-Alanine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
D-alanyl-D-alanine carboxypeptidasepolymer22525445.92UniProt (Q47746)
Pfam (PF02557)
Enterococcus faecalisDD-peptidase
2C, J
(A, B)
D-ALANINEnon-polymer89.12Chemie (DAL)
3D, E, K, L
(A, B)
GLYCEROLnon-polymer92.14Chemie (GOL)
4F, M
(A, B)
ACETATE IONnon-polymer59.02Chemie (ACT)
5G, N
(A, B)
ZINC IONnon-polymer65.42Chemie (ZN)
6H, I, O, P
(A, B)
TRIETHYLENE GLYCOLnon-polymer150.24Chemie (PGE)
7Q, R
(A, B)
waterwater18.022Chemie (HOH)
Sequence modifications
A, B: 52 - 268 (UniProt: Q47746)
PDBExternal DatabaseDetails
Leu 269-expression tag
Glu 270-expression tag
His 271-expression tag
His 272-expression tag
His 273-expression tag
His 274-expression tag
His 275-expression tag
His 276-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight50891.8
Non-Polymers*Number of molecules14
Total formula weight1396.2
All*Total formula weight52288.0
*Water molecules are not included.

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PDB entries from 2025-06-18

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