6A57
Structure of histone demethylase REF6 complexed with DNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Lysine-specific demethylase REF6 | polymer | 140 | 16521.7 | 1 | UniProt (Q9STM3) | Arabidopsis thaliana (Mouse-ear cress) | Jumonji domain-containing protein 12,Lysine-specific histone demethylase REF6,Protein RELATIVE OF EARLY FLOWERING 6 |
| 2 | B (B) | DNA (5'-D(*CP*TP*TP*TP*CP*TP*CP*TP*GP*TP*TP*TP*TP*GP*TP*C)-3') | polymer | 16 | 4812.1 | 1 | Arabidopsis thaliana | ||
| 3 | C (C) | DNA (5'-D(*GP*GP*AP*CP*AP*AP*AP*AP*CP*AP*GP*AP*GP*AP*AP*A)-3') | polymer | 16 | 4982.3 | 1 | Arabidopsis thaliana | ||
| 4 | D, E, F, G (A) | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 5 | H, I (C) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 6 | J, K, L (A, B, C) | water | water | 18.0 | 79 | Chemie (HOH) |
Sequence modifications
A: 1223 - 1360 (UniProt: Q9STM3)
| PDB | External Database | Details |
|---|---|---|
| Gly 1221 | - | expression tag |
| Ser 1222 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 26316.1 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 445.8 | |
| All* | Total formula weight | 26762.0 |
