5ZIC
Crystal structure of human GnT-V luminal domain in complex with acceptor sugar
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A | polymer | 523 | 59798.8 | 2 | UniProt (Q09328) Pfam (PF15024) | Homo sapiens (Human) | Alpha-mannoside beta-1,6-N-acetylglucosaminyltransferase,GlcNAc-T V,GNT-V,Mannoside acetylglucosaminyltransferase 5,N-acetylglucosaminyl-transferase V |
| 2 | C, D (C, D) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-6-thio-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose | branched | 561.6 | 2 | In PDB GlyTouCan (G35411CV) | |||
| 3 | E, F (A, B) | water | water | 18.0 | 218 | Chemie (HOH) |
Sequence modifications
A, B: 213 - 340 (UniProt: Q09328)
A, B: 345 - 741 (UniProt: Q09328)
| PDB | External Database | Details |
|---|---|---|
| Gly 208 | - | expression tag |
| Lys 209 | - | expression tag |
| Asp 210 | - | expression tag |
| Gly 211 | - | expression tag |
| Ser 212 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly 341 | - | linker |
| Gly 342 | - | linker |
| Gly 343 | - | linker |
| Gly 344 | - | linker |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 119597.6 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1123.1 | |
| All* | Total formula weight | 120720.7 |
