5ZGH
Cryo-EM structure of the red algal PSI-LHCR
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (1) | Lhcr1 | polymer | 175 | 19808.8 | 1 | UniProt (M1VKK5) Pfam (PF00504) | Cyanidioschyzon merolae (strain 10D) (Red alga) | |
| 2 | B (2) | Lhcr2 | polymer | 199 | 21960.4 | 1 | UniProt (M1UU36) Pfam (PF00504) | Cyanidioschyzon merolae (strain 10D) (Red alga) | |
| 3 | C (3) | Lhcr3 | polymer | 188 | 20458.5 | 1 | Cyanidioschyzon merolae (strain 10D) (Red alga) | ||
| 4 | D (A) | PsaA | polymer | 748 | 82763.5 | 1 | UniProt (Q85FY7) Pfam (PF00223) | Cyanidioschyzon merolae (strain 10D) (Red alga) | PSI-A,PsaA |
| 5 | E (B) | PsaB | polymer | 732 | 82107.9 | 1 | UniProt (Q85FY6) Pfam (PF00223) | Cyanidioschyzon merolae (strain 10D) (Red alga) | PSI-B,PsaB |
| 6 | F (C) | PsaC | polymer | 81 | 8822.3 | 1 | UniProt (Q85G47) Pfam (PF12838) | Cyanidioschyzon merolae (strain 10D) (Red alga) | 9 kDa polypeptide,PSI-C,Photosystem I subunit VII,PsaC |
| 7 | G (D) | PsaD | polymer | 139 | 15698.9 | 1 | UniProt (Q85FY0) Pfam (PF02531) | Cyanidioschyzon merolae (strain 10D) (Red alga) | |
| 8 | H (E) | PsaE | polymer | 94 | 10545.2 | 1 | UniProt (Q85FZ1) Pfam (PF02427) | Cyanidioschyzon merolae (strain 10D) (Red alga) | |
| 9 | I (F) | PsaF | polymer | 185 | 21239.3 | 1 | UniProt (Q85FS9) Pfam (PF02507) | Cyanidioschyzon merolae (strain 10D) (Red alga) | |
| 10 | J (I) | PsaI | polymer | 32 | 3408.2 | 1 | UniProt (Q85FQ6) Pfam (PF00796) | Cyanidioschyzon merolae (strain 10D) (Red alga) | |
| 11 | K (J) | PsaJ | polymer | 38 | 4410.2 | 1 | UniProt (Q85FS8) Pfam (PF01701) | Cyanidioschyzon merolae (strain 10D) (Red alga) | PSI-J |
| 12 | L (K) | PsaK | polymer | 60 | 6295.7 | 1 | UniProt (Q85G51) Pfam (PF01241) | Cyanidioschyzon merolae (strain 10D) (Red alga) | |
| 13 | M (L) | PsaL | polymer | 140 | 15157.5 | 1 | UniProt (Q85FP8) Pfam (PF02605) | Cyanidioschyzon merolae (strain 10D) (Red alga) | PSI subunit V,PSI-L |
| 14 | N (M) | PsaM | polymer | 29 | 3139.9 | 1 | UniProt (Q85G73) Pfam (PF07465) | Cyanidioschyzon merolae (strain 10D) (Red alga) | PSI-M |
| 15 | O (O) | PsaO | polymer | 155 | 16744.5 | 1 | UniProt (M1VFJ4) Pfam (PF22832) | Cyanidioschyzon merolae (strain 10D) (Red alga) | |
| 16 | AA, AB, AC, AD, AE... (1, 3, A, B, K...) | CHLOROPHYLL A | non-polymer | 893.5 | 133 | Chemie (CLA) | |||
| 17 | BA, CA, DA, EA, FA... (1, 3, 2) | (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol | non-polymer | 568.9 | 15 | Chemie (ZEX) PubChem (137350207) PubChem (91827303) | |||
| 18 | PB (3) | 1-DODECANOL | non-polymer | 186.3 | 1 | Chemie (1DO) PubChem (8193) | |||
| 19 | QB (A) | CHLOROPHYLL A ISOMER | non-polymer | 893.5 | 1 | Chemie (CL0) | |||
| 20 | DD, HF (A, B) | PHYLLOQUINONE | non-polymer | 450.7 | 2 | Chemie (PQN) PubChem (21896458) PubChem (5280483) PubChem (5284607) PubChem (7048754) PubChem (133612476) PubChem (57138572) PubChem (92436622) PubChem (93233163) PubChem (93971968) PubChem (4812) PubChem (5315258) PubChem (7048753) PubChem (7048755) PubChem (9846607) PubChem (162999945) | |||
| 21 | ED, FD (A) | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | non-polymer | 723.0 | 2 | Chemie (LHG) PubChem (65144) PubChem (46936292) PubChem (13305396) PubChem (73416066) PubChem (446440) PubChem (9547104) PubChem (11846227) PubChem (138986743) | |||
| 22 | CG, EG, GD, HD, ID... (K, L, A, B, F...) | BETA-CAROTENE | non-polymer | 536.9 | 21 | Chemie (BCR) PubChem (21672398) PubChem (176490061) PubChem (177696266) PubChem (46783370) PubChem (46846294) PubChem (5280489) PubChem (92863345) PubChem (124919640) PubChem (54603957) PubChem (54612003) PubChem (146673260) PubChem (152743364) PubChem (160505766) PubChem (86765360) PubChem (91827292) PubChem (92863346) PubChem (92863347) PubChem (92863348) PubChem (100990628) PubChem (101525094) PubChem (101525095) PubChem (573) PubChem (5315709) PubChem (5353436) PubChem (5356616) PubChem (124919639) PubChem (5927371) PubChem (6477957) PubChem (9828626) PubChem (10256668) PubChem (129651951) PubChem (12305639) PubChem (12305640) PubChem (12305642) PubChem (12305644) PubChem (12305647) PubChem (12305652) PubChem (132274419) PubChem (145925599) PubChem (159562859) PubChem (172654026) PubChem (172878405) PubChem (173398668) | |||
| 23 | LD, PF, QF (A, C) | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 3 | Chemie (SF4) | |||
| 24 | QD (A) | beta-D-glucopyranose | non-polymer | 180.2 | 1 | Chemie (BGC) | |||
| 25 | OF (B) | DIGALACTOSYL DIACYL GLYCEROL (DGDG) | non-polymer | 949.3 | 1 | Chemie (DGD) PubChem (24865462) PubChem (24865463) PubChem (46936671) PubChem (447899) PubChem (4629344) PubChem (50904896) PubChem (53480668) PubChem (15991538) PubChem (154573294) PubChem (171123158) PubChem (448441) PubChem (134746152) PubChem (140529801) | |||
| 26 | ZF (J) | (2S)-2,3-dihydroxypropyl octadecanoate | non-polymer | 358.6 | 1 | Chemie (3XQ) PubChem (24699) PubChem (15560610) PubChem (15560611) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 15 |
| Total formula weight | 332560.7 | |
| Non-Polymers* | Number of molecules | 181 |
| Total formula weight | 144611.5 | |
| All* | Total formula weight | 477172.2 |
