5ZE9
Crystal structure of AMP-PNP bound mutant A3B3 complex from Enterococcus hirae V-ATPase
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C | V-type sodium ATPase catalytic subunit A | polymer | 600 | 66347.8 | 3 | UniProt (Q08636) Pfam (PF02874) Pfam (PF16886) Pfam (PF00006) Pfam (PF22919) In PDB | Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258) | Na(+)-translocating ATPase subunit A,V-type sodium pump catalytic subunit A |
2 | D, E, F | V-type sodium ATPase subunit B | polymer | 465 | 51770.9 | 3 | UniProt (Q08637) Pfam (PF02874) Pfam (PF00006) Pfam (PF22919) In PDB | Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258) | Na(+)-translocating ATPase subunit B,V-type sodium pump subunit B |
3 | C, A, B | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | non-polymer | 506.2 | 3 | Chemie (ANP) | |||
4 | C, A, B | MAGNESIUM ION | non-polymer | 24.3 | 3 | Chemie (MG) | |||
5 | B, C, A, D, E... | GLYCEROL | non-polymer | 92.1 | 39 | Chemie (GOL) | |||
6 | D | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | non-polymer | 195.2 | 1 | Chemie (MES) | |||
7 | water | water | 18.0 | 1299 | Chemie (HOH) |
Sequence modifications
A, B, C: 1 - 593 (UniProt: Q08636)
D, E, F: 1 - 458 (UniProt: Q08637)
PDB | External Database | Details |
---|---|---|
Gly -6 | - | expression tag |
Ser -5 | - | expression tag |
Ser -4 | - | expression tag |
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
Ser -1 | - | expression tag |
Gly 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -6 | - | expression tag |
Ser -5 | - | expression tag |
Ser -4 | - | expression tag |
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
Ser -1 | - | expression tag |
Gly 0 | - | expression tag |
Tyr 65 | Leu 65 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 354356.1 | |
Non-Polymers* | Number of molecules | 46 |
Total formula weight | 5378.4 | |
All* | Total formula weight | 359734.5 |