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5ZD4

Crystal structure of MBP-fused BIL1/BZR1 in complex with double-stranded DNA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, E, F
(C, D, A, B)
Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1polymer45349819.44UniProt (P0AEY0)
UniProt (Q8S307)
Pfam (PF01547)
Pfam (PF05687)
Escherichia coli O157:H7MBP,MMBP,Maltodextrin-binding protein,Protein BIN2 SUBSTRATE 2
2C, D, G, H
(G, H, E, F)
DNA (5'-D(*TP*TP*CP*AP*CP*AP*CP*GP*TP*GP*TP*GP*AP*AP*A)-3')polymer154593.04synthetic construct
3I, J, K, L
(I, J, K, L)
alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranosebranched342.34In PDB
BIRD (PRD_900001)
GlyTouCan (G07411ON)
alpha-maltose
4M, N, O, P, Q...
(C, D, A, B)
1,2-ETHANEDIOLnon-polymer62.17Chemie (EDO)
5AA, T, U, V, W...
(F, C, D, G, H...)
waterwater18.0283Chemie (HOH)
Sequence modifications
C, D, A, B: -367 - -2 (UniProt: P0AEY0)
PDBExternal DatabaseDetails
Met -368-expression tag
Ala -286Asp 108engineered mutation
Ala -285Lys 109engineered mutation
Ala -196Glu 198engineered mutation
Ala -195Asn 199engineered mutation
Ala -129Lys 265engineered mutation
Ala -9Glu 385engineered mutation
Ala -6Lys 388engineered mutation
Ala -5Asp 389engineered mutation
Asn -1-linker
Ala 0-linker
C, D, A, B: 21 - 104 (UniProt: Q8S307)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight217649.8
BranchedNumber of molecules4
Total formula weight1369.2
Non-Polymers*Number of molecules7
Total formula weight434.5
All*Total formula weight219453.5
*Water molecules are not included.

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PDB entries from 2025-06-11

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