5ZD4
Crystal structure of MBP-fused BIL1/BZR1 in complex with double-stranded DNA
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, E, F (C, D, A, B) | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 | polymer | 453 | 49819.4 | 4 | UniProt (P0AEY0) UniProt (Q8S307) Pfam (PF01547) Pfam (PF05687) | Escherichia coli O157:H7 | MBP,MMBP,Maltodextrin-binding protein,Protein BIN2 SUBSTRATE 2 |
2 | C, D, G, H (G, H, E, F) | DNA (5'-D(*TP*TP*CP*AP*CP*AP*CP*GP*TP*GP*TP*GP*AP*AP*A)-3') | polymer | 15 | 4593.0 | 4 | synthetic construct | ||
3 | I, J, K, L (I, J, K, L) | alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | branched | 342.3 | 4 | In PDB BIRD (PRD_900001) GlyTouCan (G07411ON) | alpha-maltose | ||
4 | M, N, O, P, Q... (C, D, A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 7 | Chemie (EDO) | |||
5 | AA, T, U, V, W... (F, C, D, G, H...) | water | water | 18.0 | 283 | Chemie (HOH) |
Sequence modifications
C, D, A, B: -367 - -2 (UniProt: P0AEY0)
C, D, A, B: 21 - 104 (UniProt: Q8S307)
PDB | External Database | Details |
---|---|---|
Met -368 | - | expression tag |
Ala -286 | Asp 108 | engineered mutation |
Ala -285 | Lys 109 | engineered mutation |
Ala -196 | Glu 198 | engineered mutation |
Ala -195 | Asn 199 | engineered mutation |
Ala -129 | Lys 265 | engineered mutation |
Ala -9 | Glu 385 | engineered mutation |
Ala -6 | Lys 388 | engineered mutation |
Ala -5 | Asp 389 | engineered mutation |
Asn -1 | - | linker |
Ala 0 | - | linker |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 8 |
Total formula weight | 217649.8 | |
Branched | Number of molecules | 4 |
Total formula weight | 1369.2 | |
Non-Polymers* | Number of molecules | 7 |
Total formula weight | 434.5 | |
All* | Total formula weight | 219453.5 |