5Z20
The ternary structure of D-lactate dehydrogenase from Pseudomonas aeruginosa with NADH and oxamate
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | D-lactate dehydrogenase (Fermentative) | polymer | 345 | 37832.8 | 6 | UniProt (Q9I530) Pfam (PF00389) Pfam (PF02826) | Pseudomonas aeruginosa | |
| 2 | G, Q (A, D) | FORMIC ACID | non-polymer | 46.0 | 2 | Chemie (FMT) | |||
| 3 | H, L, N, R, U... (A, B, C, D, E...) | 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | non-polymer | 665.4 | 6 | Chemie (NAI) | |||
| 4 | I, M, O, S, V... (A, B, C, D, E...) | OXAMIC ACID | non-polymer | 89.0 | 6 | Chemie (OXM) | |||
| 5 | J, P, T, Z (A, C, D, F) | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 4 | Chemie (PGE) | |||
| 6 | K (A) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 7 | W (E) | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 1 | Chemie (PG4) | |||
| 8 | AA, BA, CA, DA, EA... (A, B, C, D, E...) | water | water | 18.0 | 908 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 1 - 329 (UniProt: Q9I530)
| PDB | External Database | Details |
|---|---|---|
| Met -15 | - | expression tag |
| Asn -14 | - | expression tag |
| His -13 | - | expression tag |
| Lys -12 | - | expression tag |
| Val -11 | - | expression tag |
| His -10 | - | expression tag |
| His -9 | - | expression tag |
| His -8 | - | expression tag |
| His -7 | - | expression tag |
| His -6 | - | expression tag |
| His -5 | - | expression tag |
| Ile -4 | - | expression tag |
| Glu -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Arg -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 226996.5 | |
| Non-Polymers* | Number of molecules | 20 |
| Total formula weight | 5520.0 | |
| All* | Total formula weight | 232516.6 |
