5YZO
Crystal structure of S9 peptidase mutant (S514A) from Deinococcus radiodurans R1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Acyl-peptide hydrolase, putative | polymer | 656 | 72712.8 | 4 | UniProt (Q9RXY9) Pfam (PF07676) Pfam (PF00326) | Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) | S9 Prolyl Oligopeptidase |
| 2 | E, F, G, J, K... (A, B, C, D) | DIMETHYL SULFOXIDE | non-polymer | 78.1 | 9 | Chemie (DMS) | |||
| 3 | H, I, L, M, P... (A, B, C) | GLYCEROL | non-polymer | 92.1 | 6 | Chemie (GOL) | |||
| 4 | T, U, V, W (A, B, C, D) | water | water | 18.0 | 3216 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 2 - 655 (UniProt: Q9RXY9)
| PDB | External Database | Details |
|---|---|---|
| Gly 0 | - | expression tag |
| Ser 1 | - | expression tag |
| Ala 514 | Ser 514 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 290851.2 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 1255.8 | |
| All* | Total formula weight | 292106.9 |
