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5YWX

Crystal structure of hematopoietic prostaglandin D synthase in complex with F092

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Hematopoietic prostaglandin D synthasepolymer19823239.64UniProt (O60760)
Pfam (PF02798)
Pfam (PF14497)
Homo sapiens (Human)H-PGDS,GST class-sigma,Glutathione S-transferase,Glutathione-dependent PGD synthase,Glutathione-requiring prostaglandin D synthase,Prostaglandin-H2 D-isomerase
2E, J, M, O
(A, B, C, D)
GLUTATHIONEnon-polymer307.34Chemie (GSH)
3F, K, N, P
(A, B, C, D)
N-[4-(2-oxopyrrolidin-1-yl)phenyl]-2-(pyridin-2-yl)pyrimidine-5-carboxamidenon-polymer359.44Chemie (93C)
4G, H, Q
(A, D)
GLYCEROLnon-polymer92.13Chemie (GOL)
5I, L
(B, C)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
6R, S, T, U
(A, B, C, D)
waterwater18.0583Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight92958.5
Non-Polymers*Number of molecules13
Total formula weight2991.7
All*Total formula weight95950.3
*Water molecules are not included.

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PDB entries from 2025-12-24

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