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5YPD

Mycobacterium Tuberculosis Methionine aminopeptidase type 1c (C105N mutant) in complex with Methionine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Methionine aminopeptidasepolymer31934453.71UniProt (A5U6L5)
Pfam (PF00557)
Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)MetAP,Peptidase M
2B, C
(A)
COBALT (II) IONnon-polymer58.92Chemie (CO)
3D
(A)
SODIUM IONnon-polymer23.01Chemie (NA)
4E
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
5F
(A)
METHIONINEnon-polymer149.21Chemie (MET)
6G, H
(A)
GLYCEROLnon-polymer92.12Chemie (GOL)
7I
(A)
waterwater18.0160Chemie (HOH)
Sequence modifications
A: 1 - 285 (UniProt: A5U6L5)
PDBExternal DatabaseDetails
Met -33-initiating methionine
Gly -32-expression tag
Ser -31-expression tag
Ser -30-expression tag
His -29-expression tag
His -28-expression tag
His -27-expression tag
His -26-expression tag
His -25-expression tag
His -24-expression tag
Ser -23-expression tag
Ser -22-expression tag
Gly -21-expression tag
Leu -20-expression tag
Val -19-expression tag
Pro -18-expression tag
Arg -17-expression tag
Gly -16-expression tag
Ser -15-expression tag
His -14-expression tag
Met -13-expression tag
Ala -12-expression tag
Ser -11-expression tag
Met -10-expression tag
Thr -9-expression tag
Gly -8-expression tag
Gly -7-expression tag
Gln -6-expression tag
Gln -5-expression tag
Met -4-expression tag
Gly -3-expression tag
Arg -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
Asn 105Cys 105engineered mutation
Ala 284Cys 284engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight34453.7
Non-Polymers*Number of molecules7
Total formula weight509.7
All*Total formula weight34963.4
*Water molecules are not included.

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PDB entries from 2025-06-11

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