5YL6
Crystal structure of Ofd2 in complex with 2OG from Schizosaccharomyces pombe
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Uncharacterized protein P8A3.02c | polymer | 184 | 21233.3 | 1 | UniProt (Q9UT12) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | 2OG(2-oxoglutarate)-iron(Fe(II)) dependent dioxygenase Ofd2 |
| 2 | B (A) | FE (III) ION | non-polymer | 55.8 | 1 | Chemie (FE) | |||
| 3 | C (A) | 2-OXOGLUTARIC ACID | non-polymer | 146.1 | 1 | Chemie (AKG) | |||
| 4 | D (A) | ACETATE ION | non-polymer | 59.0 | 1 | Chemie (ACT) | |||
| 5 | E (A) | water | water | 18.0 | 116 | Chemie (HOH) |
Sequence modifications
A: 36 - 219 (UniProt: Q9UT12)
| PDB | External Database | Details |
|---|---|---|
| Ala 86 | Leu 86 | engineered mutation |
| Leu 88 | Ile 88 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 21233.3 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 261.0 | |
| All* | Total formula weight | 21494.3 |
