5Y5P
Crystal structure of the dUTPase of white spot syndrome virus in complex with dU,PPi and Mg2+
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Wsv112 | polymer | 174 | 19029.2 | 6 | UniProt (Q77J78) Pfam (PF00692) | White spot syndrome virus (isolate Shrimp/China/Tongan/1996) (WSSV) | |
| 2 | G, K, N, O, S... (A, B, C, D, E...) | 2'-DEOXYURIDINE | non-polymer | 228.2 | 6 | Chemie (DUR) | |||
| 3 | H, I, L, P, U (A, B, D, F) | PYROPHOSPHATE 2- | non-polymer | 176.0 | 5 | Chemie (POP) | |||
| 4 | J, M, Q, R (B, C, D, E) | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
| 5 | AA, V, W, X, Y... (F, A, B, C, D...) | water | water | 18.0 | 436 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 1 - 171 (UniProt: Q77J78)
| PDB | External Database | Details |
|---|---|---|
| Ser -2 | - | expression tag |
| Asn -1 | - | expression tag |
| Ala 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 114175.5 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 2346.2 | |
| All* | Total formula weight | 116521.7 |
