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5Y4P

Crystal structure of Trypanosoma cruzi spermidine synthase in complex with 5-methoxy-2-(5-methyl-4,5-dihydro-1H-imidazol-2-yl)phenol

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Spermidine synthase, putativepolymer30434103.74UniProt (Q4DA73)
Pfam (PF17284)
Pfam (PF01564)
Trypanosoma cruzi (strain CL Brener)
2E, G, I, K
(A, B, C, D)
5'-[(S)-(3-AMINOPROPYL)(METHYL)-LAMBDA~4~-SULFANYL]-5'-DEOXYADENOSINEnon-polymer356.44Chemie (S4M)
3F, H, J, L
(A, B, C, D)
5-methoxy-2-[(5R)-5-methyl-4,5-dihydro-1H-imidazol-2-yl]phenolnon-polymer206.24Chemie (8QO)
4M, N, O, P
(A, B, C, D)
waterwater18.091Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 296 (UniProt: Q4DA73)
PDBExternal DatabaseDetails
Met -7-expression tag
Ala -6-expression tag
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
His -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight136414.9
Non-Polymers*Number of molecules8
Total formula weight2250.7
All*Total formula weight138665.6
*Water molecules are not included.

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PDB entries from 2025-12-17

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