5Y27
Crystal structure of Se-Met Dpb4-Dpb3
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | DNA polymerase epsilon subunit D | polymer | 241 | 27506.5 | 1 | UniProt (P87174) Pfam (PF00808) In PDB | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | DNA polymerase II subunit D |
2 | B | Putative transcription factor C16C4.22 | polymer | 92 | 10587.0 | 1 | UniProt (C6Y4D0) Pfam (PF00808) In PDB | Schizosaccharomyces pombe (Fission yeast) | Dpb3 |
3 | A | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
4 | water | water | 18.0 | 220 | Chemie (HOH) |
Sequence modifications
A: 2 - 210 (UniProt: P87174)
B: 1 - 87 (UniProt: C6Y4D0)
PDB | External Database | Details |
---|---|---|
Mse 0 | - | expression tag |
Gly 1 | - | expression tag |
Ala 211 | - | expression tag |
Ala 212 | - | expression tag |
Ala 213 | - | expression tag |
Glu 214 | - | expression tag |
Asn 215 | - | expression tag |
Leu 216 | - | expression tag |
Tyr 217 | - | expression tag |
Phe 218 | - | expression tag |
Gln 219 | - | expression tag |
Gly 220 | - | expression tag |
Leu 221 | - | expression tag |
Glu 222 | - | expression tag |
Asp 223 | - | expression tag |
Tyr 224 | - | expression tag |
Lys 225 | - | expression tag |
Asp 226 | - | expression tag |
Asp 227 | - | expression tag |
Asp 228 | - | expression tag |
Asp 229 | - | expression tag |
Lys 230 | - | expression tag |
His 231 | - | expression tag |
His 232 | - | expression tag |
His 233 | - | expression tag |
His 234 | - | expression tag |
His 235 | - | expression tag |
His 236 | - | expression tag |
His 237 | - | expression tag |
His 238 | - | expression tag |
His 239 | - | expression tag |
His 240 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -4 | - | expression tag |
Pro -3 | - | expression tag |
Leu -2 | - | expression tag |
Gly -1 | - | expression tag |
Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 38093.5 | |
Non-Polymers* | Number of molecules | 1 |
Total formula weight | 92.1 | |
All* | Total formula weight | 38185.6 |