Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5XLH

Crystal structure of aerobically purified and aerobically crystallized for 12weeks D. vulgaris Miyazaki F [NiFe]-hydrogenase

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(S)
Periplasmic [NiFe] hydrogenase small subunitpolymer26728789.71UniProt (P21853)Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637)NiFe hydrogenlyase small chain
2B
(L)
Periplasmic [NiFe] hydrogenase large subunitpolymer55260978.51UniProt (P21852)Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637)NiFe hydrogenlyase large chain
3C, D
(S)
IRON/SULFUR CLUSTERnon-polymer351.62Chemie (SF4)
4E
(S)
FE3-S4 CLUSTERnon-polymer295.81Chemie (F3S)
5F
(S)
(4S)-2-METHYL-2,4-PENTANEDIOLnon-polymer118.21Chemie (MPD)
6G
(L)
NI-FE OXIDIZED ACTIVE CENTERnon-polymer210.61Chemie (NFV)
7H
(L)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
PubChem (888)
8I, J
(S, L)
waterwater18.0751Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight89768.2
Non-Polymers*Number of molecules6
Total formula weight1352.1
All*Total formula weight91120.3
*Water molecules are not included.

251801

PDB entries from 2026-04-08

PDB statisticsPDBj update infoContact PDBjnumon